Current Updates of CRISPR/Cas System and Anti-CRISPR Proteins: Innovative Applications to Improve the Genome Editing Strategies.

IF 6.6 2区 医学 Q1 NANOSCIENCE & NANOTECHNOLOGY International Journal of Nanomedicine Pub Date : 2024-10-09 eCollection Date: 2024-01-01 DOI:10.2147/IJN.S479068
Khaled S Allemailem, Ahmad Almatroudi, Faris Alrumaihi, Arwa Essa Alradhi, Abdulrahman Theyab, Mohammad Algahtani, Mohmmed Othman Alhawas, Gasim Dobie, Amira A Moawad, Arshad Husain Rahmani, Amjad Ali Khan
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Abstract

The Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/CRISPR-associated sequence (CRISPR/Cas) system is a cutting-edge genome-editing tool employed to explore the functions of normal and disease-related genes. The CRISPR/Cas system has a remarkable diversity in the composition and architecture of genomic loci and Cas protein sequences. Owing to its excellent efficiency and specificity, this system adds an outstanding dimension to biomedical research on genetic manipulation of eukaryotic cells. However, safe, efficient, and specific delivery of this system to target cells and tissues and their off-target effects are considered critical bottlenecks for the therapeutic applications. Recently discovered anti-CRISPR proteins (Acr) play a significant role in limiting the effects of this system. Acrs are relatively small proteins that are highly specific to CRISPR variants and exhibit remarkable structural diversity. The in silico approaches, crystallography, and cryo-electron microscopy play significant roles in elucidating the mechanisms of action of Acrs. Acrs block the CRISPR/Cas system mainly by employing four mechanisms: CRISPR/Cas complex assembly interruption, target-binding interference, target cleavage prevention, and degradation of cyclic oligonucleotide signaling molecules. Engineered CRISPR/Cas systems are frequently used in gene therapy, diagnostics, and functional genomics. Understanding the molecular mechanisms underlying Acr action may help in the safe and effective use of CRISPR/Cas tools for genetic modification, particularly in the context of medicine. Thus, attempts to regulate prokaryotic CRISPR/Cas surveillance complexes will advance the development of antimicrobial drugs and treatment of human diseases. In this review, recent updates on CRISPR/Cas systems, especially CRISPR/Cas9 and Acrs, and their novel mechanistic insights are elaborated. In addition, the role of Acrs in the novel applications of CRISPP/Cas biotechnology for precise genome editing and other applications is discussed.

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CRISPR/Cas 系统和抗 CRISPR 蛋白的最新进展:改进基因组编辑策略的创新应用。
聚类正则间隔短联合重复序列(CRISPR)/CRISPR相关序列(CRISPR/Cas)系统是一种尖端的基因组编辑工具,用于探索正常基因和疾病相关基因的功能。CRISPR/Cas 系统在基因组位点和 Cas 蛋白序列的组成和结构方面具有显著的多样性。由于其卓越的效率和特异性,该系统为真核细胞遗传操作的生物医学研究增添了一个杰出的维度。然而,将该系统安全、高效、特异性地输送到靶细胞和组织以及其脱靶效应被认为是治疗应用的关键瓶颈。最近发现的抗CRISPR蛋白(Acr)在限制该系统的效应方面发挥了重要作用。Acrs是一种相对较小的蛋白质,对CRISPR变体具有高度特异性,并表现出显著的结构多样性。硅学方法、晶体学和冷冻电镜在阐明 Acrs 的作用机制方面发挥着重要作用。Acrs 主要通过四种机制阻断 CRISPR/Cas 系统:CRISPR/Cas复合体组装中断、目标结合干扰、目标裂解阻止和环状寡核苷酸信号分子降解。经过改造的 CRISPR/Cas 系统经常被用于基因治疗、诊断和功能基因组学。了解 Acr 作用的分子机制有助于安全有效地使用 CRISPR/Cas 工具进行基因改造,尤其是在医学领域。因此,调控原核生物 CRISPR/Cas 监控复合物的尝试将推动抗菌药物的开发和人类疾病的治疗。本综述阐述了 CRISPR/Cas 系统(尤其是 CRISPR/Cas9 和 Acrs)的最新进展及其新的机理见解。此外,还讨论了 Acrs 在 CRISPP/Cas 生物技术用于精确基因组编辑和其他应用的新应用中的作用。
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来源期刊
International Journal of Nanomedicine
International Journal of Nanomedicine NANOSCIENCE & NANOTECHNOLOGY-PHARMACOLOGY & PHARMACY
CiteScore
14.40
自引率
3.80%
发文量
511
审稿时长
1.4 months
期刊介绍: The International Journal of Nanomedicine is a globally recognized journal that focuses on the applications of nanotechnology in the biomedical field. It is a peer-reviewed and open-access publication that covers diverse aspects of this rapidly evolving research area. With its strong emphasis on the clinical potential of nanoparticles in disease diagnostics, prevention, and treatment, the journal aims to showcase cutting-edge research and development in the field. Starting from now, the International Journal of Nanomedicine will not accept meta-analyses for publication.
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