Dong Min Han, Ji Hoon Jeon, Myeong Seo Jin, Dae Gyu Choi, Jeong Min Kim, Hülya Bayburt, Byeong Jun Choi, Che Ok Jeon
{"title":"<i>Yoonia algicola</i> sp. nov., <i>Yoonia rhodophyticola</i> sp. nov. and <i>Yoonia phaeophyticola</i> sp. nov., isolated from marine algae.","authors":"Dong Min Han, Ji Hoon Jeon, Myeong Seo Jin, Dae Gyu Choi, Jeong Min Kim, Hülya Bayburt, Byeong Jun Choi, Che Ok Jeon","doi":"10.1099/ijsem.0.006545","DOIUrl":null,"url":null,"abstract":"<p><p>Three Gram-stain-negative, strictly aerobic, non-motile, oxidase- and catalase-positive, short-rod-shaped bacteria, designated as strains G8-12<sup>T</sup>, SS1-5<sup>T</sup> and BS5-3<sup>T</sup>, were isolated from marine algae in South Korea. Strain G8-12<sup>T</sup> exhibited optimal growth at 20-25 °C, pH 8.0 and 2.0-2.5% (w/v) NaCl, while strains SS1-5<sup>T</sup> and BS5-3<sup>T</sup> grew optimally at 25 °C, pH 7.0 and 1.5% NaCl. All strains contained ubiquinone-10 as the sole respiratory quinone, with phosphatidylglycerol and phosphatidylcholine as major polar lipids, and C<sub>18 : 1</sub> <i> ω</i>7<i>c</i> and C<sub>16 : 0</sub> as major fatty acids (>5 %); C<sub>18 : 1</sub> <i> ω</i>7<i>c</i> 11-methyl and C<sub>18 : 1</sub> 2-OH were additionally identified as major fatty acids in strain SS1-5<sup>T</sup>. The genomic DNA G+C contents were 57.0, 58.3 and 56.4% for strains G8-12<sup>T</sup>, SS1-5<sup>T</sup> and BS5-3<sup>T</sup>, respectively. Strains G8-12<sup>T</sup>, SS1-5<sup>T</sup> and BS5-3<sup>T</sup> exhibited less than 74.8% average nucleotide identity (ANI) and 19.7% digital DNA-DNA hybridization (dDDH) values with each other, indicating that they represent different species. Phylogenetic analyses based on both 16S rRNA gene and genome sequences revealed that strains G8-12<sup>T</sup>, SS1-5<sup>T</sup> and BS5-3<sup>T</sup> form distinct phylogenetic lineages within the genus <i>Yoonia</i>. Relative to other closely related <i>Yoonia</i> species, these strains exhibited ANI and dDDH values below 83.5 and 26.9%, respectively, suggesting that they constitute novel species within the genus <i>Yoonia</i>. Based on their phenotypic, chemotaxonomic and phylogenetic characteristics, strains G8-12<sup>T</sup>, SS1-5<sup>T</sup> and BS5-3<sup>T</sup> represent three novel species of the genus <i>Yoonia</i>, for which the names <i>Yoonia algicola</i> sp. nov. (G8-12<sup>T</sup>=KACC 22753<sup>T</sup>=JCM 35790<sup>T</sup>), <i>Yoonia rhodophyticola</i> sp. nov. (SS1-5<sup>T</sup>=KACC 22649<sup>T</sup>=JCM 35753<sup>T</sup>) and <i>Yoonia phaeophyticola</i> sp. nov. (BS5-3<sup>T</sup>=KACC 22648<sup>T</sup>=JCM 35751<sup>T</sup>) are proposed, respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"74 10","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11482539/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006545","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Three Gram-stain-negative, strictly aerobic, non-motile, oxidase- and catalase-positive, short-rod-shaped bacteria, designated as strains G8-12T, SS1-5T and BS5-3T, were isolated from marine algae in South Korea. Strain G8-12T exhibited optimal growth at 20-25 °C, pH 8.0 and 2.0-2.5% (w/v) NaCl, while strains SS1-5T and BS5-3T grew optimally at 25 °C, pH 7.0 and 1.5% NaCl. All strains contained ubiquinone-10 as the sole respiratory quinone, with phosphatidylglycerol and phosphatidylcholine as major polar lipids, and C18 : 1 ω7c and C16 : 0 as major fatty acids (>5 %); C18 : 1 ω7c 11-methyl and C18 : 1 2-OH were additionally identified as major fatty acids in strain SS1-5T. The genomic DNA G+C contents were 57.0, 58.3 and 56.4% for strains G8-12T, SS1-5T and BS5-3T, respectively. Strains G8-12T, SS1-5T and BS5-3T exhibited less than 74.8% average nucleotide identity (ANI) and 19.7% digital DNA-DNA hybridization (dDDH) values with each other, indicating that they represent different species. Phylogenetic analyses based on both 16S rRNA gene and genome sequences revealed that strains G8-12T, SS1-5T and BS5-3T form distinct phylogenetic lineages within the genus Yoonia. Relative to other closely related Yoonia species, these strains exhibited ANI and dDDH values below 83.5 and 26.9%, respectively, suggesting that they constitute novel species within the genus Yoonia. Based on their phenotypic, chemotaxonomic and phylogenetic characteristics, strains G8-12T, SS1-5T and BS5-3T represent three novel species of the genus Yoonia, for which the names Yoonia algicola sp. nov. (G8-12T=KACC 22753T=JCM 35790T), Yoonia rhodophyticola sp. nov. (SS1-5T=KACC 22649T=JCM 35753T) and Yoonia phaeophyticola sp. nov. (BS5-3T=KACC 22648T=JCM 35751T) are proposed, respectively.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.