Xanthomonas citri pv. eucalyptorum strain 4866-2_S43 (formerly X. axonopodis pv. eucalyptorum): the causal agent of bacterial leaf blight on eucalypts recovered in Argentina.

Access microbiology Pub Date : 2024-10-07 eCollection Date: 2024-01-01 DOI:10.1099/acmi.0.000827.v3

German Matias Traglia, Mousami Poudel, Samuel Miño, Blanca Isabel Canteros, G V Minsavage, Anuj Sharma, Erica M Goss, Jeffrey B Jones, Alberto Gochez

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Abstract

We report the draft genome assembly of strain 4866-2_S43 isolated from a eucalyptus lesion in Argentina and what until recently was caused by Xanthomonas citri pv. eucalyptorum (Xce). The genome size is 5 188 607 bp, with a G+C content of 64.66%. Comparative analysis reveals that the closest relative of strain 4866-2_S43 is Xce LPF 602, isolated in Brazil. Comparison of the whole genome sequences revealed an average nucleotide identity (ANI) of 99.96% between the two strains. ANIs were determined between the whole genome sequence of strain 4866-2_S43 and the genomes of all currently validated Xanthomonas spp. These results revealed that strain 4866-2_S43 shared >95% similarity with X. citri pv. citri and X. citri pv. phaseoli, and <95% with X. euvesicatoria pv. alfalfae, X. euvesicatoria pv. perforans, and X. euvesicatoria pathovars euvesicatoria and eucalyptii.

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Xanthomonas citri pv. eucalyptorum strain 4866-2_S43 (formerly X. axonopodis pv. eucalyptorum): the causal agent of bacterial leaf blight on eucalyptorum recovered in Argentina.

我们报告了从阿根廷桉树病害中分离出的菌株 4866-2_S43 的基因组组装草案，直到最近，该病害一直是由柠檬黄单胞菌（Xanthomonas citri pv. eucalyptorum，Xce）引起的。基因组大小为 5 188 607 bp，G+C 含量为 64.66%。比较分析表明，菌株 4866-2_S43 的近亲是分离自巴西的 Xce LPF 602。全基因组序列比较显示，两株菌株的平均核苷酸同一性（ANI）为 99.96%。这些结果表明，菌株 4866-2_S43 与 X. citri pv. citri 和 X. citri pv. phaseoli，以及 X. euvesicatoria pv. alfalfae、X. euvesicatoria pv. perforans 和 X. euvesicatoria pathovars euvesicatoria 和 eucalyptii 的相似度大于 95%。

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Access microbiology

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