Leveraging multi-omics tools to comprehend responses and tolerance mechanisms of heavy metals in crop plants

IF 3.9 4区 生物学 Q1 GENETICS & HEREDITY Functional & Integrative Genomics Pub Date : 2024-10-23 DOI:10.1007/s10142-024-01481-1
Sidra Charagh, Hong Wang, Jingxin Wang, Ali Raza, Suozhen Hui, Ruijie Cao, Liang Zhou, Shaoqing Tang, Peisong Hu, Shikai Hu
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Abstract

Extreme anthropogenic activities and current farming techniques exacerbate the effects of water and soil impurity by hazardous heavy metals (HMs), severely reducing agricultural output and threatening food safety. In the upcoming years, plants that undergo exposure to HM might cause a considerable decline in the development as well as production. Hence, plants have developed sophisticated defensive systems to evade or withstand the harmful consequences of HM. These mechanisms comprise the uptake as well as storage of HMs in organelles, their immobilization via chemical formation by organic chelates, and their removal using many ion channels, transporters, signaling networks, and TFs, amid other approaches. Among various cutting-edge methodologies, omics, most notably genomics, transcriptomics, proteomics, metabolomics, miRNAomics, phenomics, and epigenomics have become game-changing approaches, revealing information about the genes, proteins, critical metabolites as well as microRNAs that govern HM responses and resistance systems. With the help of integrated omics approaches, we will be able to fully understand the molecular processes behind plant defense, enabling the development of more effective crop protection techniques in the face of climate change. Therefore, this review comprehensively presented omics advancements that will allow resilient and sustainable crop plants to flourish in areas contaminated with HMs.

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利用多组学工具了解作物对重金属的反应和耐受机制。
极端的人为活动和当前的耕作技术加剧了有害重金属(HMs)对水和土壤的污染,严重降低了农业产量并威胁到食品安全。在未来几年中,暴露于重金属的植物可能会导致发育和产量大幅下降。因此,植物开发出了复杂的防御系统,以规避或抵御 HM 的有害后果。这些机制包括吸收 HMs 并将其储存在细胞器中,通过有机螯合物的化学成分固定 HMs,以及利用多种离子通道、转运体、信号网络和 TFs 等方法清除 HMs。在各种前沿方法中,全局组学,尤其是基因组学、转录物组学、蛋白质组学、代谢组学、miRNA 组学、表观组学和表观基因组学已成为改变游戏规则的方法,揭示了有关基因、蛋白质、关键代谢物以及管理 HM 反应和抗性系统的 microRNA 的信息。在综合全局组学方法的帮助下,我们将能够全面了解植物防御背后的分子过程,从而在气候变化面前开发出更有效的作物保护技术。因此,本综述全面介绍了全局组学的进展,这些进展将使具有抗逆性和可持续发展能力的作物植物在受 HMs 污染的地区蓬勃发展。
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来源期刊
CiteScore
3.50
自引率
3.40%
发文量
92
审稿时长
2 months
期刊介绍: Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes. The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?
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