Statistical Thermodynamic Description of Self-Assembly of Large Inclusions in Biological Membranes.

IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Current Issues in Molecular Biology Pub Date : 2024-09-26 DOI:10.3390/cimb46100643
Andres De Virgiliis, Ariel Meyra, Alina Ciach
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Abstract

Recent studies revealed anomalous underscreening in concentrated electrolytes, and we suggest that the underscreened electrostatic forces between membrane proteins play a significant role in the process of self-assembly. In this work, we assumed that the underscreened electrostatic forces compete with the thermodynamic Casimir forces induced by concentration fluctuations in the lipid bilayer, and developed a simplified model for a binary mixture of oppositely charged membrane proteins with different preference to liquid-ordered and liquid-disordered domains in the membrane. In the model, like macromolecules interact with short-range Casimir attraction and long-range electrostatic repulsion, and the cross-interaction is of the opposite sign. We determine energetically favored patterns in a system in equilibrium with a bulk reservoir of the macromolecules. Different patterns consisting of clusters and stripes of the two components and of vacancies are energetically favorable for different values of the chemical potentials. Effects of thermal flutuations at low temperature are studied using Monte Carlo simulations in grand canonical and canonical ensembles. For fixed numbers of the macromolecules, a single two-component cluster with a regular pattern coexists with dispersed small one-component clusters, and the number of small clusters depends on the ratio of the numbers of the molecules of the two components. Our results show that the pattern formation is controlled by the shape of the interactions, the density of the proteins, and the proportion of the components.

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生物膜中大型内含物自组装的统计热力学描述。
最近的研究揭示了浓电解质中异常的屏蔽不足现象,我们认为膜蛋白之间的屏蔽不足静电力在自组装过程中发挥了重要作用。在这项工作中,我们假定膜蛋白之间的静电下屏蔽力与脂质双分子层中浓度波动引起的热力学卡西米尔力竞争,并建立了一个简化模型,用于描述对膜中液态有序域和液态无序域具有不同偏好的带相反电荷的膜蛋白二元混合物。在该模型中,同类大分子以短程卡西米尔吸引力和长程静电排斥力相互作用,交叉作用的符号相反。我们确定了一个与大分子体储库处于平衡状态的系统中的能量偏好模式。在不同的化学势值下,由两种成分的簇状和条状以及空位组成的不同模式在能量上是有利的。通过大规范和规范集合中的蒙特卡罗模拟,研究了低温下热楞的影响。在大分子数量固定的情况下,具有规则模式的单个双组分团簇与分散的单组分小团簇共存,小团簇的数量取决于双组分分子的数量比。我们的研究结果表明,图案的形成受制于相互作用的形状、蛋白质的密度以及各组分的比例。
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来源期刊
Current Issues in Molecular Biology
Current Issues in Molecular Biology 生物-生化研究方法
CiteScore
2.90
自引率
3.20%
发文量
380
审稿时长
>12 weeks
期刊介绍: Current Issues in Molecular Biology (CIMB) is a peer-reviewed journal publishing review articles and minireviews in all areas of molecular biology and microbiology. Submitted articles are subject to an Article Processing Charge (APC) and are open access immediately upon publication. All manuscripts undergo a peer-review process.
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