Time will tell: time-lapse technology and artificial intelligence to set time cut-offs indicating embryo incompetence.

IF 6 1区 医学 Q1 OBSTETRICS & GYNECOLOGY Human reproduction Pub Date : 2024-10-25 DOI:10.1093/humrep/deae239
Giovanni Coticchio, Alessandro Bartolacci, Valentino Cimadomo, Samuele Trio, Federica Innocenti, Andrea Borini, Alberto Vaiarelli, Laura Rienzi, Aisling Ahlström, Danilo Cimadomo
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It has produced morphokinetic algorithms aimed at selecting embryos able to generate a viable pregnancy, however, such efforts have had limited success. Regardless, the potential of this technology for improving multiple aspects of the IVF process remains considerable. Specifically, TLT could be harnessed to discriminate developmentally incompetent embryos: i.e. those unable to develop to the blastocyst stage or affected by full-chromosome meiotic aneuploidies. If proven valuable, this application would prevent the non-productive use of such embryos, thereby improving laboratory and clinical efficiency and reducing patient stress and costs due to unnecessary embryo transfer and cryopreservation.</p><p><strong>Study design, size, duration: </strong>The training dataset involved embryos of PGT-A cycles cultured in Embryoscope with a single media (836 euploid and 1179 aneuploid blastocysts and 1874 arrested embryos; 2013-2020). Selection criteria were ejaculated sperm, own (not donated) fresh oocytes, trophectoderm biopsy and comprehensive-chromosome-testing to diagnose uniform aneuploidies. Out-of-sample (30% of training), internal (299 euploid and 490 aneuploid blastocysts and 680 arrested embryos; 2021-2022) and external (97 euploid, 110 aneuploid and 603 untested blastocysts and 514 arrested embryos, 2018 to early 2022) validations were conducted.</p><p><strong>Participants/materials, setting, methods: </strong>A training dataset (70%) was used to define thresholds. Several models were generated by fitting outcomes to each timing (tPNa-t8) and maternal age. ROC curves pinpointed in-sample classification values associated with 95%, 99% and 99.99% true-positive rate for predicting incompetence. These values were integrated with upper limits of maternal age ranges (<35, 35-37, 38-40, 41-42, and >42 years) in logit functions to identify time cut-offs, whose accuracy was tested on the validation datasets through confusion matrices.</p><p><strong>Main results and the role of chance: </strong>For developmental (in)competence, the best performing (i) tPNa cut-offs were 27.8 hpi (error-rate: 0/743), 32.6 hpi (error rate: 0/934), 26.8 hpi (error rate: 0/1178), 22.9 hpi (error-rate: 1/654, 0.1%) and 17.2 hpi (error rate: 4/423, 0.9%) in the <35, 35-37, 38-40, 41-42, and >42 years groups, respectively; (ii) tPNf cut-offs were 36.7 hpi (error rate: 0/738), 47.9 hpi (error rate: 0/921), 45.6 hpi (error rate: 1/1156, 0.1%), 44.1 hpi (error rate: 0/647) and 41.8 hpi (error rate: 0/417); (iii) t2 cut-offs were 50.9 hpi (error rate: 0/724), 49 hpi (error rate: 0/915), 47.1 hpi (error rate: 0/1146), 45.8 hpi (error rate: 0/636) and 43.9 hpi (error rate: 0/416); (iv) t4 cut-offs were 66.9 hpi (error rate: 0/683), 80.7 hpi (error rate: 0/836), 77.1 hpi (error rate: 0/1063), 74.7 hpi (error rate: 0/590) and 71.2 hpi (error rate: 0/389); and (v) t8 cut-offs were 118.1 hpi (error rate: 0/619), 110.6 hpi (error rate: 0/772), 140 hpi (error rate: 0/969), 135 hpi (error rate: 0/533) and 127.5 hpi (error rate: 0/355). tPNf and t2 showed a significant association with chromosomal (in)competence, also when adjusted for maternal age. Nevertheless, the relevant cut-offs were found to perform less well and were redundant compared with the blastocyst development cut-offs.</p><p><strong>Limitations, reasons for caution: </strong>Study limits are its retrospective design and the datasets being unbalanced towards advanced maternal age cases. The potential effects of abnormal cleavage patterns were not assessed. Larger sample sizes and external validations in other clinical settings are warranted.</p><p><strong>Wider implications of the findings: </strong>If confirmed by independent studies, this approach could significantly improve the efficiency of ART, by reducing the workload and patient impacts (extended culture and cleavage stage cryopreservation or transfer) associated with embryos that ultimately are developmentally incompetent and should not be considered for treatment. 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引用次数: 0

Abstract

Study question: Can more reliable time cut-offs of embryo developmental incompetence be generated by combining time-lapse technology (TLT), artificial intelligence, and preimplantation genetics screening for aneuploidy (PGT-A)?

Summary answer: Embryo developmental incompetence can be better predicted by time cut-offs at multiple developmental stages and for different ranges of maternal age.

What is known already: TLT is instrumental for the continual and undisturbed observation of embryo development. It has produced morphokinetic algorithms aimed at selecting embryos able to generate a viable pregnancy, however, such efforts have had limited success. Regardless, the potential of this technology for improving multiple aspects of the IVF process remains considerable. Specifically, TLT could be harnessed to discriminate developmentally incompetent embryos: i.e. those unable to develop to the blastocyst stage or affected by full-chromosome meiotic aneuploidies. If proven valuable, this application would prevent the non-productive use of such embryos, thereby improving laboratory and clinical efficiency and reducing patient stress and costs due to unnecessary embryo transfer and cryopreservation.

Study design, size, duration: The training dataset involved embryos of PGT-A cycles cultured in Embryoscope with a single media (836 euploid and 1179 aneuploid blastocysts and 1874 arrested embryos; 2013-2020). Selection criteria were ejaculated sperm, own (not donated) fresh oocytes, trophectoderm biopsy and comprehensive-chromosome-testing to diagnose uniform aneuploidies. Out-of-sample (30% of training), internal (299 euploid and 490 aneuploid blastocysts and 680 arrested embryos; 2021-2022) and external (97 euploid, 110 aneuploid and 603 untested blastocysts and 514 arrested embryos, 2018 to early 2022) validations were conducted.

Participants/materials, setting, methods: A training dataset (70%) was used to define thresholds. Several models were generated by fitting outcomes to each timing (tPNa-t8) and maternal age. ROC curves pinpointed in-sample classification values associated with 95%, 99% and 99.99% true-positive rate for predicting incompetence. These values were integrated with upper limits of maternal age ranges (<35, 35-37, 38-40, 41-42, and >42 years) in logit functions to identify time cut-offs, whose accuracy was tested on the validation datasets through confusion matrices.

Main results and the role of chance: For developmental (in)competence, the best performing (i) tPNa cut-offs were 27.8 hpi (error-rate: 0/743), 32.6 hpi (error rate: 0/934), 26.8 hpi (error rate: 0/1178), 22.9 hpi (error-rate: 1/654, 0.1%) and 17.2 hpi (error rate: 4/423, 0.9%) in the <35, 35-37, 38-40, 41-42, and >42 years groups, respectively; (ii) tPNf cut-offs were 36.7 hpi (error rate: 0/738), 47.9 hpi (error rate: 0/921), 45.6 hpi (error rate: 1/1156, 0.1%), 44.1 hpi (error rate: 0/647) and 41.8 hpi (error rate: 0/417); (iii) t2 cut-offs were 50.9 hpi (error rate: 0/724), 49 hpi (error rate: 0/915), 47.1 hpi (error rate: 0/1146), 45.8 hpi (error rate: 0/636) and 43.9 hpi (error rate: 0/416); (iv) t4 cut-offs were 66.9 hpi (error rate: 0/683), 80.7 hpi (error rate: 0/836), 77.1 hpi (error rate: 0/1063), 74.7 hpi (error rate: 0/590) and 71.2 hpi (error rate: 0/389); and (v) t8 cut-offs were 118.1 hpi (error rate: 0/619), 110.6 hpi (error rate: 0/772), 140 hpi (error rate: 0/969), 135 hpi (error rate: 0/533) and 127.5 hpi (error rate: 0/355). tPNf and t2 showed a significant association with chromosomal (in)competence, also when adjusted for maternal age. Nevertheless, the relevant cut-offs were found to perform less well and were redundant compared with the blastocyst development cut-offs.

Limitations, reasons for caution: Study limits are its retrospective design and the datasets being unbalanced towards advanced maternal age cases. The potential effects of abnormal cleavage patterns were not assessed. Larger sample sizes and external validations in other clinical settings are warranted.

Wider implications of the findings: If confirmed by independent studies, this approach could significantly improve the efficiency of ART, by reducing the workload and patient impacts (extended culture and cleavage stage cryopreservation or transfer) associated with embryos that ultimately are developmentally incompetent and should not be considered for treatment. Pending validation, these data might be applied also in static embryo observation settings.

Study funding/competing interest(s): This study was supported by the participating institutions. The authors have no conflicts of interest to declare.

Trial registration number: N/A.

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时间会证明一切:通过延时摄影技术和人工智能设定时间分界线,显示胚胎发育不全。
研究问题:结合延时技术(TLT)、人工智能和胚胎植入前非整倍体遗传学筛查(PGT-A),能否生成更可靠的胚胎发育不全时间临界值?在多个发育阶段和不同的母体年龄范围内,通过时间截断可以更好地预测胚胎发育不全:TLT有助于持续、不受干扰地观察胚胎发育。它已经产生了形态动力学算法,旨在选择能够产生可存活妊娠的胚胎,但这些努力取得的成功有限。无论如何,这项技术在改进试管婴儿过程的多个方面仍具有相当大的潜力。具体来说,TLT 可用于区分发育不全的胚胎:即无法发育到囊胚阶段或受全染色体减数分裂非整倍体影响的胚胎。如果这一应用被证明是有价值的,那么它将避免对这类胚胎的非生产性使用,从而提高实验室和临床效率,减少患者因不必要的胚胎移植和冷冻保存而产生的压力和费用:训练数据集涉及在 Embryoscope 中使用单一培养基培养的 PGT-A 周期胚胎(836 个优倍囊胚和 1179 个非优倍囊胚以及 1874 个停育胚胎;2013-2020 年)。选择标准为射精精子、自有(非捐赠)新鲜卵母细胞、滋养层活检和全面染色体检测,以诊断均匀非整倍体。进行了样本外(培训的30%)、内部(299个优倍体和490个非优倍体囊胚和680个着床胚胎;2021-2022年)和外部(97个优倍体、110个非优倍体和603个未经检测的囊胚和514个着床胚胎,2018年至2022年初)验证:使用训练数据集(70%)来定义阈值。通过将结果与每个时机(tPNa-t8)和母体年龄拟合,生成了多个模型。ROC 曲线确定了与预测无能力的 95%、99% 和 99.99% 真实阳性率相关的样本内分类值。这些值与对数函数中产妇年龄范围的上限(42 岁)相结合,以确定时间分界线,并通过混淆矩阵在验证数据集上测试其准确性:在发育(不)能力方面,42 岁组中表现最好的 (i) tPNa 临界值分别为 27.8 hpi(错误率:0/743)、32.6 hpi(错误率:0/934)、26.8 hpi(错误率:0/1178)、22.9 hpi(错误率:1/654,0.1%)和 17.2 hpi(错误率:4/423,0.9%);(ii) tPNf 临界值分别为 36.7 hpi(错误率:0/743)、26.8 hpi(错误率:0/1178)、22.9 hpi(错误率:1/654,0.1%)和 17.2 hpi(错误率:4/423,0.9%)。7 hpi(误差率:0/738)、47.9 hpi(误差率:0/921)、45.6 hpi(误差率:1/1156,0.1%)、44.1 hpi(误差率:0/647)和 41.8 hpi(误差率:0/417);(iii) t2 临界值分别为 50.9 hpi(误差率:0/724)、49 hpi(误差率:0/915)、47.1 hpi(错误率:0/1146)、45.8 hpi(错误率:0/636)和 43.9 hpi(错误率:0/416);(iv) t4 临界值分别为 66.9 hpi(错误率:0/683)、80.7 hpi(误差率:0/836)、77.1 hpi(误差率:0/1063)、74.7 hpi(误差率:0/590)和 71.2 hpi(误差率:0/389);以及 (v) t8 临界值为 118.1 hpi(误差率:0/619)、110.6 hpi(误差率:0/772)、140 hpi(误差率:0/969)、135 hpi(误差率:0/533)和 127.5 hpi(误差率:0/355)。然而,与囊胚发育临界值相比,相关临界值的表现较差,而且是多余的:研究的局限性在于其回顾性设计以及数据集在高龄产妇方面的不平衡。没有评估异常裂解模式的潜在影响。有必要扩大样本量,并在其他临床环境中进行外部验证:如果得到独立研究的证实,这种方法可大大提高 ART 的效率,因为它可减少与胚胎相关的工作量和对患者的影响(延长培养和分裂期冷冻保存或移植),而这些胚胎最终发育不良,不应考虑进行治疗。在验证之前,这些数据也可应用于静态胚胎观察环境:本研究得到了参与机构的支持。作者不存在利益冲突:不适用。
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来源期刊
Human reproduction
Human reproduction 医学-妇产科学
CiteScore
10.90
自引率
6.60%
发文量
1369
审稿时长
1 months
期刊介绍: Human Reproduction features full-length, peer-reviewed papers reporting original research, concise clinical case reports, as well as opinions and debates on topical issues. Papers published cover the clinical science and medical aspects of reproductive physiology, pathology and endocrinology; including andrology, gonad function, gametogenesis, fertilization, embryo development, implantation, early pregnancy, genetics, genetic diagnosis, oncology, infectious disease, surgery, contraception, infertility treatment, psychology, ethics and social issues.
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