Innovative use of depth data to estimate energy intake and expenditure in Adélie penguins.

IF 2.8 2区 生物学 Q2 BIOLOGY Journal of Experimental Biology Pub Date : 2024-10-25 DOI:10.1242/jeb.249201
Benjamin Dupuis, Akiko Kato, Olivia Hicks, Danuta M Wisniewska, Coline Marciau, Frederic Angelier, Yan Ropert-Coudert, Marianna Chimienti
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Abstract

Energy governs species' life histories and pace of living, requiring individuals to make trade-offs. However, measuring energetic parameters in the wild is challenging, often resulting in data collected from heterogeneous sources. This complicates comprehensive analysis and hampers transferability within and across case studies. We present a novel framework, combining information obtained from eco-physiology and biologging techniques, to estimate both energy expended and acquired on 48 Adélie penguins (Pygoscelis adeliae) during the chick-rearing stage. We employ the machine learning algorithm random forest (RF) to predict accelerometry-derived metrics for feeding behaviour using depth data (our proxy for energy acquisition). We also build a time-activity model calibrated with doubly labelled water data to estimate energy expenditure. Using depth-derived time spent diving and amount of vertical movement in the sub-surface phase, we accurately predict energy expenditure (R2=0.68, RMSE=344.67). Movement metrics derived from the RF algorithm deployed on depth data were able to accurately (accuracy=0.82) detect the same feeding behaviour predicted from accelerometry. The RF predicted accelerometry-estimated time spent feeding more accurately (R2=0.81) compared to historical proxies like number of undulations (R2=0.51) or dive bottom duration (R2=0.31). The proposed framework is accurate, reliable, and simple to implement on data from biologging technology widely-used on marine species. It enables coupling energy intake and expenditure, which is crucial to further assess individual trade-offs. Our work allows us to revisit historical data, to study how long-term environmental changes affect animals' energetics.

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利用深度数据估算阿德利企鹅能量摄入和消耗的创新方法。
能量决定着物种的生活史和生活节奏,需要个体做出权衡。然而,在野外测量能量参数极具挑战性,往往导致数据收集来源不一。这使得综合分析变得复杂,并妨碍了案例研究内部和之间的可转移性。我们提出了一个新颖的框架,结合从生态生理学和生物测量技术中获得的信息,来估算 48 只阿德利企鹅(Pygoscelis adeliae)在育雏阶段消耗和获得的能量。我们采用机器学习算法随机森林(RF),利用深度数据(我们的能量获取替代指标)预测由加速度计得出的进食行为指标。我们还建立了一个时间活动模型,利用双标记水数据进行校准,以估算能量消耗。利用深度数据得出的潜水时间和水下阶段的垂直运动量,我们可以准确预测能量消耗(R2=0.68,RMSE=344.67)。根据深度数据部署的射频算法得出的运动指标能够准确地(准确度=0.82)检测出与加速度计预测的相同的摄食行为。与起伏次数(R2=0.51)或潜底持续时间(R2=0.31)等历史代用指标相比,射频算法能更准确地预测加速度计估算的摄食时间(R2=0.81)。所提出的框架准确、可靠,且易于在广泛应用于海洋物种的生物记录技术数据上实施。它可以将能量摄入和消耗结合起来,这对进一步评估个体权衡至关重要。我们的工作使我们能够重新审视历史数据,研究长期环境变化如何影响动物的能量学。
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来源期刊
CiteScore
5.50
自引率
10.70%
发文量
494
审稿时长
1 months
期刊介绍: Journal of Experimental Biology is the leading primary research journal in comparative physiology and publishes papers on the form and function of living organisms at all levels of biological organisation, from the molecular and subcellular to the integrated whole animal.
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