On preserving anatomical detail in statistical shape analysis for clustering: focus on left atrial appendage morphology.

Frontiers in network physiology Pub Date : 2024-10-10 eCollection Date: 2024-01-01 DOI:10.3389/fnetp.2024.1467180
Matthew T Lee, Vincenzo Martorana, Rafizul Islam Md, Raphael Sivera, Andrew C Cook, Leon Menezes, Gaetano Burriesci, Ryo Torii, Giorgia M Bosi
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Abstract

Introduction: Statistical shape analysis (SSA) with clustering is often used to objectively define and categorise anatomical shape variations. However, studies until now have often focused on simplified anatomical reconstructions, despite the complexity of studied anatomies. This work aims to provide insights on the anatomical detail preservation required for SSA of highly diverse and complex anatomies, with particular focus on the left atrial appendage (LAA). This anatomical region is clinically relevant as the location of almost all left atrial thrombi forming during atrial fibrillation (AF). Moreover, its highly patient-specific complex architecture makes its clinical classification especially subjective.

Methods: Preliminary LAA meshes were automatically detected after robust image selection and wider left atrial segmentation. Following registration, four additional LAA mesh datasets were created as reductions of the preliminary dataset, with surface reconstruction based on reduced sample point densities. Utilising SSA model parameters determined to optimally represent the preliminary dataset, SSA model performance for the four simplified datasets was calculated. A representative simplified dataset was selected, and clustering analysis and performance were evaluated (compared to clinical labels) between the original trabeculated LAA anatomy and the representative simplification.

Results: As expected, simplified anatomies have better SSA evaluation scores (compactness, specificity and generalisation), corresponding to simpler LAA shape representation. However, oversimplification of shapes may noticeably affect 3D model output due to differences in geometric correspondence. Furthermore, even minor simplification may affect LAA shape clustering, where the adjusted mutual information (AMI) score of the clustered trabeculated dataset was 0.67, in comparison to 0.12 for the simplified dataset.

Discussion: This study suggests that greater anatomical preservation for complex and diverse LAA morphologies, currently neglected, may be more useful for shape categorisation via clustering analyses.

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在用于聚类的统计形状分析中保留解剖细节:关注左心房阑尾形态。
简介带有聚类的统计形状分析(SSA)通常用于客观地定义和分类解剖形状的变化。然而,尽管所研究的解剖结构非常复杂,但迄今为止的研究往往侧重于简化的解剖重建。这项工作的目的是就高度多样化和复杂解剖的 SSA 所需的解剖细节保留提供见解,尤其侧重于左心房阑尾(LAA)。该解剖区域与临床密切相关,因为几乎所有左心房血栓都是在心房颤动(房颤)时形成的。此外,该区域因患者而异的复杂结构使其临床分类尤为主观:方法:经过稳健的图像选择和更广泛的左心房分割,自动检测出初步的 LAA 网状结构。注册后,创建了四个额外的 LAA 网格数据集,作为初步数据集的还原,并根据减少的样本点密度进行表面重建。利用确定的 SSA 模型参数对初步数据集进行最佳表示,计算出四个简化数据集的 SSA 模型性能。选择了一个有代表性的简化数据集,并评估了原始小梁式 LAA 解剖学与有代表性的简化数据集之间的聚类分析和性能(与临床标签进行比较):不出所料,简化后的解剖结构具有更好的 SSA 评估得分(紧凑性、特异性和概括性),与更简单的 LAA 形状表示相对应。然而,由于几何对应关系的差异,形状的过度简化可能会明显影响三维模型的输出。此外,即使是轻微的简化也可能影响 LAA 形状的聚类,聚类小梁数据集的调整互信息(AMI)得分为 0.67,而简化数据集的得分为 0.12:本研究表明,对于目前被忽视的复杂多样的 LAA 形态,更多的解剖学保留可能更有助于通过聚类分析进行形状分类。
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