Development and characterization of polymorphic microsatellite markers for Periplaneta americana (Blattodea: Blattidae).

IF 2.1 3区 农林科学 Q1 ENTOMOLOGY Journal of Insect Science Pub Date : 2024-09-01 DOI:10.1093/jisesa/ieae096
Li Lim, Abdul Hafiz Ab Majid
{"title":"Development and characterization of polymorphic microsatellite markers for Periplaneta americana (Blattodea: Blattidae).","authors":"Li Lim, Abdul Hafiz Ab Majid","doi":"10.1093/jisesa/ieae096","DOIUrl":null,"url":null,"abstract":"<p><p>The American cockroach, Periplaneta americana (Blattodea: Blattidae), is a prevalent urban pest with significant public health implications. This study aimed to develop and validate novel microsatellite markers to understand the genetic diversity and population genetic structure of P. americana. In this study, a total of 397,898 microsatellite markers were developed based on 24.6 million genomic DNA sequences. Twenty microsatellite markers were selected and amplified with varying numbers of alleles ranging from 0 to 35. Seven out of 20 markers were characterized for their polymorphism and amplification efficiency. The polymorphic information content (PIC) values of these markers were high (0.669 to 0.950) implying their effectiveness. These markers also revealed 7 to 35 alleles per locus across tested samples, highlighting their utility in assessing the extensive genetic variation within Periplaneta americana populations. These results provide insightful information that may be applied to the genetic analysis of the American cockroach population using the developed species-specific microsatellite marker.</p>","PeriodicalId":16156,"journal":{"name":"Journal of Insect Science","volume":"24 5","pages":""},"PeriodicalIF":2.1000,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11520420/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Insect Science","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1093/jisesa/ieae096","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENTOMOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

The American cockroach, Periplaneta americana (Blattodea: Blattidae), is a prevalent urban pest with significant public health implications. This study aimed to develop and validate novel microsatellite markers to understand the genetic diversity and population genetic structure of P. americana. In this study, a total of 397,898 microsatellite markers were developed based on 24.6 million genomic DNA sequences. Twenty microsatellite markers were selected and amplified with varying numbers of alleles ranging from 0 to 35. Seven out of 20 markers were characterized for their polymorphism and amplification efficiency. The polymorphic information content (PIC) values of these markers were high (0.669 to 0.950) implying their effectiveness. These markers also revealed 7 to 35 alleles per locus across tested samples, highlighting their utility in assessing the extensive genetic variation within Periplaneta americana populations. These results provide insightful information that may be applied to the genetic analysis of the American cockroach population using the developed species-specific microsatellite marker.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Periplaneta americana(蜚蠊目:蜚蠊科)多态性微卫星标记的开发和特征描述。
美洲大蠊(Periplaneta americana)(蜚蠊科:Blattodea: Blattidae)是一种普遍存在的城市害虫,对公共卫生有重大影响。本研究旨在开发和验证新型微卫星标记,以了解美洲大蠊的遗传多样性和种群遗传结构。在这项研究中,基于 2460 万个基因组 DNA 序列共开发了 397 898 个微卫星标记。选择并扩增了 20 个等位基因数从 0 到 35 不等的微卫星标记。对 20 个标记中的 7 个进行了多态性和扩增效率鉴定。这些标记的多态性信息含量(PIC)值很高(0.669 至 0.950),表明它们很有效。这些标记还显示,在所有测试样本中,每个位点有 7 至 35 个等位基因,突出表明了它们在评估 Periplaneta americana 种群内部广泛遗传变异方面的实用性。这些结果提供了具有洞察力的信息,可用于利用开发的物种特异性微卫星标记对美洲大蠊种群进行遗传分析。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Journal of Insect Science
Journal of Insect Science 生物-昆虫学
CiteScore
3.70
自引率
0.00%
发文量
80
审稿时长
7.5 months
期刊介绍: The Journal of Insect Science was founded with support from the University of Arizona library in 2001 by Dr. Henry Hagedorn, who served as editor-in-chief until his death in January 2014. The Entomological Society of America was very pleased to add the Journal of Insect Science to its publishing portfolio in 2014. The fully open access journal publishes papers in all aspects of the biology of insects and other arthropods from the molecular to the ecological, and their agricultural and medical impact.
期刊最新文献
Bee cups 2.0: P-cups as single-use cages for honey bee (Hymenoptera: Apidae) experiments. Direct and indirect effects of selective insecticides on 2 generalist predators of Bemisia tabaci (Hemiptera: Aleyrodidae). Low-density migratory beekeeping induces intermediate disturbance effects on native bee communities in Tibetan Plateau alpine meadows. Population records reveal expanded habitat preference for the endemic, predaceous Jamaican fungus gnat Neoditomyia farri (Diptera, Keroplatidae). Cellulose degradation in Glenea cantor (Fabricius) (Coleoptera: Cerambycidae): functional characterization of GcEGaseZ7 and Cellulase reveals a novel enzymatic activity.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1