Functional roles of the [2Fe-2S] clusters in Synechocystis PCC 6803 Hox [NiFe]-hydrogenase reactivity with ferredoxins.

IF 4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biological Chemistry Pub Date : 2024-10-28 DOI:10.1016/j.jbc.2024.107936
Matthew R Blahut, Michael E Dawson, Effie C Kisgeropoulos, Anastasia E Ledinina, David W Mulder, Paul W King
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Abstract

The HoxEFUYH complex of Synechocystis PCC 6803 (S. 6803) consists of a HoxEFU ferredoxin:NAD(P)H oxidoreductase subcomplex and a HoxYH [NiFe]-hydrogenase subcomplex that catalyzes reversible H2 oxidation. Prior studies have suggested that the presence of HoxE is required for reactivity with ferredoxin, however, it is unknown how HoxE is functionally integrated into the electron transfer network of the HoxEFU:ferredoxin complex. Deciphering electron transfer pathways is challenged by the rich iron-sulfur cluster content of HoxEFU, which includes a [2Fe-2S] cluster in each subunit, along with multiple [4Fe-4S] clusters and a flavin cofactor. To resolve the role of HoxE, we determined the biophysical and thermodynamic properties of each [2Fe-2S] cluster in HoxEFU using steady-state and potentiometric EPR analysis in combination with square wave voltammetry (SWV). The temperature-dependence of the EPR signal for HoxE confirmed the coordination of a single [2Fe-2S] cluster that was shown by SWV to have an Em = -424 mV (vs SHE). Strikingly, when the Em of the HoxE [2Fe-2S] cluster was analyzed in HoxEFU titrations, it was shifted by > 100 mV to an Em < -525 mV (vs SHE). EPR titrations of HoxEFU gave an Em value for the [2Fe-2S] cluster of HoxF, Em = -419 mV and HoxU, Em = -349 mV. These values were used to re-analyze the diaphorase kinetics in reactions performed with ferredoxins with varying Em's. The results are formulated into a model of HoxEFU:ferredoxin reactivity and the role of HoxE in mediating electron transfer within the HoxEFU:ferredoxin complex.

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Synechocystis PCC 6803 Hox [NiFe]-hydrogenase 与铁氧还蛋白反应中 [2Fe-2S] 簇的功能作用。
Synechocystis PCC 6803(S. 6803)的 HoxEFUYH 复合物由一个 HoxEFU ferredoxin:NAD(P)H 氧化还原酶亚复合物和一个催化可逆 H2 氧化的 HoxYH [NiFe]-hydrogenase 亚复合物组成。先前的研究表明,与铁氧还蛋白发生反应需要 HoxE 的存在,但 HoxE 是如何在功能上整合到 HoxEFU:ferredoxin 复合物的电子传递网络中的,目前还不得而知。HoxEFU 含有丰富的铁硫簇,每个亚基中都有一个[2Fe-2S]簇,还有多个[4Fe-4S]簇和一个黄素辅助因子,这给破译电子传递途径带来了挑战。为了了解 HoxE 的作用,我们使用稳态和电位 EPR 分析法结合方波伏安法(SWV)测定了 HoxEFU 中每个 [2Fe-2S] 簇的生物物理和热力学性质。HoxE EPR 信号的温度依赖性证实了单个[2Fe-2S]团簇的配位,SWV 显示该团簇的 Em = -424 mV(对 SHE)。令人吃惊的是,当在 HoxEFU 滴定中分析 HoxE [2Fe-2S] 簇的 Em 时,它偏移了 > 100 mV 至 Em < -525 mV(相对于 SHE)。HoxEFU 的 EPR 滴定结果显示,HoxF 的 [2Fe-2S] 簇的 Em 值为 Em = -419 mV,HoxU 的 Em 值为 Em = -349 mV。利用这些值重新分析了与不同 Em 值的铁氧还蛋白反应中的二磷酸盐酶动力学。研究结果被归纳为 HoxEFU:铁氧还蛋白反应模型,以及 HoxE 在 HoxEFU:铁氧还蛋白复合物内介导电子转移的作用。
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Journal of Biological Chemistry
Journal of Biological Chemistry Biochemistry, Genetics and Molecular Biology-Biochemistry
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4.20%
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期刊介绍: The Journal of Biological Chemistry welcomes high-quality science that seeks to elucidate the molecular and cellular basis of biological processes. Papers published in JBC can therefore fall under the umbrellas of not only biological chemistry, chemical biology, or biochemistry, but also allied disciplines such as biophysics, systems biology, RNA biology, immunology, microbiology, neurobiology, epigenetics, computational biology, ’omics, and many more. The outcome of our focus on papers that contribute novel and important mechanistic insights, rather than on a particular topic area, is that JBC is truly a melting pot for scientists across disciplines. In addition, JBC welcomes papers that describe methods that will help scientists push their biochemical inquiries forward and resources that will be of use to the research community.
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