Cross-Cohort Mixture Analysis: A Data Integration Approach With Applications on Gestational Age and DNA-Methylation-Derived Gestational Age Acceleration Metrics

IF 1.3 3区 生物学 Q4 MATHEMATICAL & COMPUTATIONAL BIOLOGY Biometrical Journal Pub Date : 2024-10-29 DOI:10.1002/bimj.202300270
Elena Colicino, Roberto Ascari, Hachem Saddiki, Francheska Merced-Nieves, Nicolò Foppa Pedretti, Kathi Huddleston, Robert O Wright, Rosalind J Wright, Program Collaborators for Environmental Influences on Child Health Outcomes
{"title":"Cross-Cohort Mixture Analysis: A Data Integration Approach With Applications on Gestational Age and DNA-Methylation-Derived Gestational Age Acceleration Metrics","authors":"Elena Colicino,&nbsp;Roberto Ascari,&nbsp;Hachem Saddiki,&nbsp;Francheska Merced-Nieves,&nbsp;Nicolò Foppa Pedretti,&nbsp;Kathi Huddleston,&nbsp;Robert O Wright,&nbsp;Rosalind J Wright,&nbsp;Program Collaborators for Environmental Influences on Child Health Outcomes","doi":"10.1002/bimj.202300270","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>Data integration of multiple studies can provide enhanced exposure contrast and statistical power to examine associations between environmental exposure mixtures and health outcomes. Extant research has combined populations and identified an overall mixture–outcome association, without accounting for differences across studies. We extended the Bayesian Weighted Quantile Sum (BWQS) regression to a hierarchical framework to analyze mixtures across cohorts. The hierarchical BWQS (HBWQS) approach aggregates sample size of multiple cohorts to calculate an overall mixture index, thereby identifying the most harmful exposure(s) across cohorts; and provides cohort-specific associations between the overall mixture index and the outcome. We showed results from 10 simulated scenarios including four mixture components in three, eight, and ten populations, and two real-case examples on the association between prenatal metal mixture exposure—comprising arsenic, cadmium, and lead—and both gestational age and epigenetic-derived gestational age acceleration metrics. Simulated scenarios showed good empirical coverage and little bias for all HBWQS-estimated parameters. The Watanabe–Akaike information criterion showed a better average performance for the HBWQS regression than the BWQS across scenarios. HBWQS results incorporating cohorts within the national Environmental influences on Child Health Outcomes (ECHO) program from three different sites showed that the environmental mixture was negatively associated with gestational age in a single site. The HBWQS approach facilitates the combination of multiple cohorts and accounts for individual cohort differences in mixture analyses. HBWQS findings can be used to develop regulations, policies, and interventions regarding multiple co-occurring environmental exposures and it will maximize the use of extant publicly available data.</p>\n </div>","PeriodicalId":55360,"journal":{"name":"Biometrical Journal","volume":"66 8","pages":""},"PeriodicalIF":1.3000,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biometrical Journal","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/bimj.202300270","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MATHEMATICAL & COMPUTATIONAL BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Data integration of multiple studies can provide enhanced exposure contrast and statistical power to examine associations between environmental exposure mixtures and health outcomes. Extant research has combined populations and identified an overall mixture–outcome association, without accounting for differences across studies. We extended the Bayesian Weighted Quantile Sum (BWQS) regression to a hierarchical framework to analyze mixtures across cohorts. The hierarchical BWQS (HBWQS) approach aggregates sample size of multiple cohorts to calculate an overall mixture index, thereby identifying the most harmful exposure(s) across cohorts; and provides cohort-specific associations between the overall mixture index and the outcome. We showed results from 10 simulated scenarios including four mixture components in three, eight, and ten populations, and two real-case examples on the association between prenatal metal mixture exposure—comprising arsenic, cadmium, and lead—and both gestational age and epigenetic-derived gestational age acceleration metrics. Simulated scenarios showed good empirical coverage and little bias for all HBWQS-estimated parameters. The Watanabe–Akaike information criterion showed a better average performance for the HBWQS regression than the BWQS across scenarios. HBWQS results incorporating cohorts within the national Environmental influences on Child Health Outcomes (ECHO) program from three different sites showed that the environmental mixture was negatively associated with gestational age in a single site. The HBWQS approach facilitates the combination of multiple cohorts and accounts for individual cohort differences in mixture analyses. HBWQS findings can be used to develop regulations, policies, and interventions regarding multiple co-occurring environmental exposures and it will maximize the use of extant publicly available data.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
跨队列混合分析:数据整合方法在妊娠年龄和 DNA 甲基化衍生妊娠年龄加速度指标中的应用
对多项研究进行数据整合,可以增强暴露对比度和统计能力,从而检验环境暴露混合物与健康结果之间的关联。现有研究已将人群结合起来,并确定了总体的混合物-结果关联,但没有考虑不同研究之间的差异。我们将贝叶斯加权量子和(BWQS)回归扩展到分层框架,以分析不同队列的混合物。分层 BWQS(HBWQS)方法汇总了多个队列的样本量,以计算总体混合物指数,从而确定各队列中最有害的暴露;并提供总体混合物指数与结果之间的队列特异性关联。我们展示了 10 个模拟情景的结果,包括 3 个、8 个和 10 个人群中的 4 种混合物成分,以及两个关于产前金属混合物暴露(包括砷、镉和铅)与胎龄和表观遗传学衍生胎龄加速指标之间关系的真实案例。模拟情景显示,所有 HBWQS 估算参数都具有良好的经验覆盖性,偏差很小。Watanabe-Akaike信息标准显示,HBWQS回归在各种情况下的平均性能优于BWQS。HBWQS 的结果显示,在全国环境对儿童健康结果的影响(ECHO)项目中,来自三个不同地点的队列显示,在一个地点,环境混合物与胎龄呈负相关。HBWQS 方法有助于将多个队列结合起来,并在混合分析中考虑到个别队列的差异。HBWQS 的研究结果可用于制定有关多种并发环境暴露的法规、政策和干预措施,并将最大限度地利用现有的公开数据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Biometrical Journal
Biometrical Journal 生物-数学与计算生物学
CiteScore
3.20
自引率
5.90%
发文量
119
审稿时长
6-12 weeks
期刊介绍: Biometrical Journal publishes papers on statistical methods and their applications in life sciences including medicine, environmental sciences and agriculture. Methodological developments should be motivated by an interesting and relevant problem from these areas. Ideally the manuscript should include a description of the problem and a section detailing the application of the new methodology to the problem. Case studies, review articles and letters to the editors are also welcome. Papers containing only extensive mathematical theory are not suitable for publication in Biometrical Journal.
期刊最新文献
Survivor Average Causal Effects for Continuous Time: A Principal Stratification Approach to Causal Inference With Semicompeting Risks Wavelet-Mixed Landmark Survival Models for the Effect of Short-Term Changes of Potassium in Heart Failure Patients Issue Information: Biometrical Journal 2'25 Parametric Estimation of the Mean Number of Events in the Presence of Competing Risks Unscaled Indices for Assessing Agreement of Functional Data
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1