Clinical significance and potential mechanism of hsa_circ_0006892 in acute respiratory distress syndrome complicated with pulmonary fibrosis.

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Biology Reports Pub Date : 2024-11-04 DOI:10.1007/s11033-024-10047-0
Shuping Zhang, Lingbo Rong, Guangwen Long, Feihong Huang, Qian Zhang, Xiulin Yang, Hongpeng Sun, Chunling Ji, Rui-Hai Ye
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Abstract

Background: Acute respiratory distress syndrome (ARDS) is a serious acute lung injury, and can develop into pulmonary fibrosis (PLF). Circular RNAs (circRNAs) regulatory network in ARDS is important. The study explored the role of hsa_circ_0006892 in the occurrence of ARDS and the development of PLF.

Methods: Hsa_circ_0006892 levels were verified in serum samples of 203 ARDS patients with or without PLF, and the diagnostic value was evaluated through ROC. Cox regression analysis was performed to identify PLF-related factors. The downstream target genes were predicted online. The function and pathway of key genes were annotated through GO and KEGG pathway analysis. Protein-protein interaction (PPI) analysis was performed for the examination of protein interactions.

Results: qRT-PCR determined the downregulation of hsa_circ_0006892 in the serum of both ARDS and PLF patients. Hsa_circ_0006892 can differentiate ARDS from controls, and independently related to the development of PLF. Nine targeted related miRNAs were integrated with dysregulated miRNAs from GSE27430 dataset. Clinically, miR-486-3p was the only miRNA that was significantly different in both ARDS and PLF groups, and was determined to be the target of hsa_circ_0006892. 180 target genes of miR-486-3p were predicted, which were integrated with ARDS and PLF-related GSE84439 and GSE38958 datasets. Go and KEGG pathway analysis identified Ras signaling pathway as the most commonly enriched pathway in the overlapped genes.

Conclusions: The present results identified the differentially expressed hsa_circ_0006892 in ARDS and PLF, and suggested a possible molecular mechanism of hsa_circ_0006892/miR-486-3p axis.

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hsa_circ_0006892 在并发肺纤维化的急性呼吸窘迫综合征中的临床意义和潜在机制。
背景:急性呼吸窘迫综合征(ARDS)是一种严重的急性肺损伤,可发展为肺纤维化(PLF)。环状 RNAs(circRNAs)在 ARDS 中的调控网络非常重要。该研究探讨了 hsa_circ_0006892 在 ARDS 发生和 PLF 发展中的作用。通过Cox回归分析确定了与PLF相关的因素。在线预测了下游靶基因。通过 GO 和 KEGG 通路分析对关键基因的功能和通路进行了注释。结果:qRT-PCR 结果显示,ARDS 和 PLF 患者血清中的 hsa_circ_0006892 下调。Hsa_circ_0006892能区分ARDS和对照组,并与PLF的发展独立相关。研究人员从 GSE27430 数据集中整合了 9 个与靶标相关的 miRNA。在临床上,miR-486-3p 是唯一一个在 ARDS 和 PLF 两组中都有显著差异的 miRNA,并被确定为 hsa_circ_0006892 的靶基因。预测了 miR-486-3p 的 180 个靶基因,并与 ARDS 和 PLF 相关的 GSE84439 和 GSE38958 数据集进行了整合。Go和KEGG通路分析发现Ras信号通路是重叠基因中最常见的富集通路:本研究结果发现了在 ARDS 和 PLF 中差异表达的 hsa_circ_0006892,并提出了 hsa_circ_0006892/miR-486-3p 轴的可能分子机制。
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来源期刊
Molecular Biology Reports
Molecular Biology Reports 生物-生化与分子生物学
CiteScore
5.00
自引率
0.00%
发文量
1048
审稿时长
5.6 months
期刊介绍: Molecular Biology Reports publishes original research papers and review articles that demonstrate novel molecular and cellular findings in both eukaryotes (animals, plants, algae, funghi) and prokaryotes (bacteria and archaea).The journal publishes results of both fundamental and translational research as well as new techniques that advance experimental progress in the field and presents original research papers, short communications and (mini-) reviews.
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