An Innovative Telomere-associated Prognosis Model in AML: Predicting Immune Infiltration and Treatment Responsiveness.

IF 3.5 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Current medicinal chemistry Pub Date : 2024-11-05 DOI:10.2174/0109298673334218241021044800
Binyang Song, Jinzhan Lou, Lijun Mu, Xiao Lu, Jian Sun, Bo Tang
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Abstract

Aims: To build an innovative telomere-associated scoring model to predict prognosis and treatment responsiveness in acute myeloid leukemia (AML).

Background: AML is a highly heterogeneous malignant hematologic disorder with a poor prognosis. While telomere maintenance is frequently observed in tumors, investigations into telomere-related genes (TRGs) in AML remain limited.

Objectives: This study aimed to identify prognostic TRGs using the least absolute shrinkage and selection operator (LASSO) Cox regression and multivariate Cox regression, evaluate their predictive value, explore the association between TRG scores and immune cell infiltration, and assess the sensitivity of high-scoring AML patients to chemotherapeutic agents.

Method: Univariate Cox regression analysis was conducted on the TCGA cohort to identify prognostic TRGs and to develop the TRG scoring model using LASSO-Cox and multivariate Cox regression. Validation was performed on the GSE37642 cohort. Immune cell infiltration patterns were assessed through computational analysis, and the sensitivity to chemotherapeutic agents was evaluated.

Results: Thirteen prognostic TRGs were identified, and a seven-TRG scoring model (including NOP10, OBFC1, PINX1, RPA2, SMG5, MAPKAPK5, and SMN1) was developed. Higher TRG scores were associated with a poorer prognosis, as confirmed in the GSE37642 cohort, and remained an independent prognostic factor even after adjusting for other clinical characteristics. The high-score group was characterized by elevated infiltration of B cells, T helper cells, natural killer cells, tumor-infiltrating lymphocytes, regulatory T (Treg) cells, M2 macrophages, neutrophils, and monocytes, along with reduced infiltration of gamma delta T cells, CD4- T cells, and resting mast cells. Moreover, high infiltration of M2 macrophages and Tregs was associated with poor overall survival compared to low infiltration. Notably, high-risk AML patients were resistant to Erlotinib, Parthenolide, and Nutlin-3a, but sensitive to AC220, Midostaurin, and Tipifarnib. Additionally, using RT-qPCR, we observed significantly higher expression of two model genes, OBFC1 and SMN1, in AML tissues compared to control tissues.

Conclusion: This innovative TRG scoring model demonstrates considerable predictive value for AML patient prognosis, offering valuable insights for optimizing treatment strategies and personalized medicine approaches. The identified TRGs and associated scoring models could aid in risk stratification and guide tailored therapeutic interventions in AML patients.

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一种创新的急性髓细胞白血病端粒相关预后模型:预测免疫渗透和治疗反应性
目的:建立一个创新的端粒相关评分模型,以预测急性髓性白血病(AML)的预后和治疗反应性:背景:急性髓性白血病是一种预后不良的高度异质性恶性血液病。背景:急性髓性白血病是一种高度异质性的恶性血液病,预后较差。虽然在肿瘤中经常观察到端粒的维持,但对急性髓性白血病中端粒相关基因(TRGs)的研究仍然有限:本研究旨在利用最小绝对收缩和选择算子(LASSO)Cox回归和多变量Cox回归确定预后TRG,评估其预测价值,探讨TRG评分与免疫细胞浸润之间的关联,并评估高分AML患者对化疗药物的敏感性:方法:对TCGA队列进行单变量Cox回归分析,以确定预后性TRG,并利用LASSO-Cox和多变量Cox回归建立TRG评分模型。在GSE37642队列中进行了验证。通过计算分析评估了免疫细胞浸润模式,并评估了对化疗药物的敏感性:结果:发现了13个预后TRGs,并建立了7个TRGs评分模型(包括NOP10、OBFC1、PINX1、RPA2、SMG5、MAPKAPK5和SMN1)。TRG 评分越高,预后越差,这一点在 GSE37642 队列中得到了证实,即使在调整了其他临床特征后,TRG 评分仍然是一个独立的预后因素。高分组的特点是 B 细胞、T 辅助细胞、自然杀伤细胞、肿瘤浸润淋巴细胞、调节性 T(Treg)细胞、M2 巨噬细胞、中性粒细胞和单核细胞浸润增加,而γ δ T 细胞、CD4- T 细胞和静止肥大细胞浸润减少。此外,与低浸润率相比,M2 巨噬细胞和 Tregs 的高浸润率与总生存率低有关。值得注意的是,高风险急性髓细胞白血病患者对厄洛替尼、帕替诺利特和Nutlin-3a耐药,但对AC220、米多司他林和替法尼敏感。此外,通过 RT-qPCR,我们观察到 AML 组织中两个模型基因 OBFC1 和 SMN1 的表达明显高于对照组织:这一创新的TRG评分模型对急性髓细胞性白血病患者的预后具有相当高的预测价值,为优化治疗策略和个性化医疗方法提供了宝贵的见解。鉴定出的TRGs和相关评分模型有助于对AML患者进行风险分层,并指导有针对性的治疗干预。
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来源期刊
Current medicinal chemistry
Current medicinal chemistry 医学-生化与分子生物学
CiteScore
8.60
自引率
2.40%
发文量
468
审稿时长
3 months
期刊介绍: Aims & Scope Current Medicinal Chemistry covers all the latest and outstanding developments in medicinal chemistry and rational drug design. Each issue contains a series of timely in-depth reviews and guest edited thematic issues written by leaders in the field covering a range of the current topics in medicinal chemistry. The journal also publishes reviews on recent patents. Current Medicinal Chemistry is an essential journal for every medicinal chemist who wishes to be kept informed and up-to-date with the latest and most important developments.
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