L-Cysteine Oxalates with Dimeric and Trimeric Cations

IF 1.2 4区 化学 Q4 CHEMISTRY, INORGANIC & NUCLEAR Journal of Structural Chemistry Pub Date : 2024-11-11 DOI:10.1134/S0022476624100172
V. V. Ghazaryan, G. Giester, V. S. Minkov, E. V. Boldyreva, A. M. Petrosyan
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Abstract

Single crystals of two new compounds, (L-CysH⋯L-Cys)(HC2O4) (I) and (L-CysH⋯L-Cys⋯L-CysH)(HC2O4)2·0.5H2O (II), were obtained. Crystal structures were solved and refined using single-crystal X-ray diffraction, and compared with the previously known orthorhombic and monoclinic modifications of the simple salt (L-CysH)(HC2O4). Compound I crystallizes in the triclinic crystal system (space group P1, = 2) and contains (L-CysH⋯L-Cys) dimeric cations with very short O⋯O interatomic distance of 2.434(2) Å. Hydrogen oxalate anions form head-to-tail type chains with very short hydrogen bonds, characterized by O⋯O distances of 2.422(2) Å and 2.417(3) Å. The crystal lattice of II is monoclinic with the space group C2, Z = 4. It contains a new type of cation, that has never been observed before for cysteine salts, i.e. trimeric (L-CysH⋯L-Cys⋯L-CysH) cation. Protonated L-cysteinium cations are connected to the zwitterionic L-cysteine moiety through the same oxygen atom of the carboxylate group via hydrogen bonds, with O···O distances of 2.6410(18) Å and 2.4888(19) Å. Similar to the structure I, the hydrogen oxalate anions form head-to-tail type chains linked by short hydrogen bonds with O⋯O distances of 2.4369(17) Å and 2.4330(17) Å, respectively. The crystals were characterized by IR and Raman spectroscopy. The batches obtained on crystallization were also characterized by X-ray powder diffraction, in order to check the phase purity of all the sample.

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具有二聚和三聚阳离子的 L-半胱氨酸草酸盐
获得了两种新化合物 (L-CysH⋯L-Cys)(HC2O4) (I) 和 (L-CysH⋯L-Cys⋯L-CysH)(HC2O4)2-0.5H2O (II) 的单晶。利用单晶 X 射线衍射法解决和完善了晶体结构,并将其与之前已知的单盐 (L-CysH)(HC2O4) 的正方晶和单斜晶结构进行了比较。化合物 I 在三棱晶系(空间群 P1,Z = 2)中结晶,含有 (L-CysH⋯L-Cys) 二聚阳离子,其 O⋯O 原子间距离非常短,仅为 2.434(2) Å。草酸氢阴离子形成头尾型链,氢键非常短,O⋯O 间距分别为 2.422(2) Å 和 2.417(3) Å。它含有一种从未在半胱氨酸盐中观察到的新型阳离子,即三聚(L-CysH⋯L-Cys⋯L-CysH)阳离子。质子化的 L-Cysteinium 阳离子通过羧酸基团的相同氧原子以氢键与齐聚物 L-Cysteine 分子相连,O--O 间距分别为 2.6410(18) Å 和 2.4888(19) Å;与结构 I 相似,草酸氢阴离子通过短氢键形成头尾型链,O⋯O 间距分别为 2.4369(17) Å 和 2.4330(17) Å。晶体采用红外光谱和拉曼光谱进行表征。为了检查所有样品的相纯度,还用 X 射线粉末衍射对结晶得到的批次进行了表征。
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来源期刊
Journal of Structural Chemistry
Journal of Structural Chemistry 化学-无机化学与核化学
CiteScore
1.60
自引率
12.50%
发文量
142
审稿时长
8.3 months
期刊介绍: Journal is an interdisciplinary publication covering all aspects of structural chemistry, including the theory of molecular structure and chemical bond; the use of physical methods to study the electronic and spatial structure of chemical species; structural features of liquids, solutions, surfaces, supramolecular systems, nano- and solid materials; and the crystal structure of solids.
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