Utilizing MEDT analysis of [3 + 2] cycloaddition reaction: x-ray crystallography of spirooxindole linked with thiophene/furan heterocycles and triazole framework

IF 4.3 2区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY BMC Chemistry Pub Date : 2024-11-14 DOI:10.1186/s13065-024-01343-8
Abdulmajeed Abdullah Alayyaf, M. Ali, Moayad Abdullah Alwehaibi, Muhanna K. Al-Muhanna, Saied M. Soliman, Mar Ríos-Gutiérrez, Matti Haukka, Assem Barakat
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Abstract

Hybridization of spirooxindole with different pharmacophores such as triazole and heterocycle such as thiophene and furan moiety was achieved by the [3 + 2] cycloaddition (32CA) reaction approach. Structural investigations of the compounds 4a and 4b were performed using X-ray single crystal structure determinations and Hirshfeld analysis. Both compounds crystallized in monoclinic crystal system. The space group is P21/c for 4a and P21/n for 4b. The crystal parameters are a = 10.2619(3) Å, b = 13.6776(3) Å, c = 10.9318(3), β = 116.640(4)° for the former while a = 13.0012(1) Å, b = 14.9692(1) Å, c = 14.1178(1) Å, β = 97.101(1)° for the latter. In both compounds, the aryl group and the triazole moieties are twisted from one another. The twist angle is 84.75˚for 4a while 86.64˚ for 4b. Based on Hirshfeld calculations, the Cl…H, O…H, N…H and C…H non-covalent interactions in 4a while the O…H interactions in 4b are the most important. The molecular mechanism of the key 32CA reaction between the in situ generated azomethine ylides and the corresponding chalcones has been studied within the Molecular Electron Density Theory (MEDT). The MEDT study reveals that the low activation energies and high experimental selectivity are the result of the supernucleophilic character of the ylides and the strong electrophilicity of the chalcones, which favour the process through a high polar character. This high polar character accounts for the total endo selectivity experimentally found.

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利用 MEDT 分析 [3 + 2] 环加成反应:与噻吩/呋喃杂环和三唑框架相连的螺吲哚的 X 射线晶体学。
通过[3 + 2]环加成(32CA)反应方法,实现了螺吲哚与三唑和杂环(如噻吩和呋喃)等不同药源的杂化。利用 X 射线单晶结构测定和 Hirshfeld 分析法对化合物 4a 和 4b 进行了结构研究。这两种化合物均以单斜晶系结晶。4a 的空间群为 P21/c,4b 的空间群为 P21/n。前者的晶体参数为 a = 10.2619(3)埃,b = 13.6776(3)埃,c = 10.9318(3),β = 116.640(4)°;后者的晶体参数为 a = 13.0012(1)埃,b = 14.9692(1)埃,c = 14.1178(1)埃,β = 97.101(1)°。在这两种化合物中,芳基和三唑分子相互扭曲。4a 的扭转角为 84.75˚,而 4b 的扭转角为 86.64˚。根据 Hirshfeld 计算,4a 中的 Cl...H、O...H、N...H 和 C...H 非共价相互作用最为重要,而 4b 中的 O...H 相互作用最为重要。分子电子密度理论(MEDT)研究了原位生成的偶氮甲基酰化物与相应的查耳酮之间的关键 32CA 反应的分子机理。分子电子密度理论研究表明,低活化能和高实验选择性是由酰化物的超亲核性和查耳酮的强亲电性造成的,它们通过高极性特征促进了反应过程。这种高极性是实验发现的总内选择性的原因。
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来源期刊
BMC Chemistry
BMC Chemistry Chemistry-General Chemistry
CiteScore
5.30
自引率
2.20%
发文量
92
审稿时长
27 weeks
期刊介绍: BMC Chemistry, formerly known as Chemistry Central Journal, is now part of the BMC series journals family. Chemistry Central Journal has served the chemistry community as a trusted open access resource for more than 10 years – and we are delighted to announce the next step on its journey. In January 2019 the journal has been renamed BMC Chemistry and now strengthens the BMC series footprint in the physical sciences by publishing quality articles and by pushing the boundaries of open chemistry.
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