Uncertainty Based Machine Learning-DFT Hybrid Framework for Accelerating Geometry Optimization.

IF 5.7 1区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Chemical Theory and Computation Pub Date : 2024-11-12 DOI:10.1021/acs.jctc.4c00953
Akksay Singh, Jiaqi Wang, Graeme Henkelman, Lei Li
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Abstract

Geometry optimization is an important tool used for computational simulations in the fields of chemistry, physics, and material science. Developing more efficient and reliable algorithms to reduce the number of force evaluations would lead to accelerated computational modeling and materials discovery. Here, we present a delta method-based neural network-density functional theory (DFT) hybrid optimizer to improve the computational efficiency of geometry optimization. Compared to previous active learning approaches, our algorithm adds two key features: a modified delta method incorporating force information to enhance efficiency in uncertainty estimation, and a quasi-Newton approach based upon a Hessian matrix calculated from the neural network; the later improving stability of optimization near critical points. We benchmarked our optimizer against commonly used optimization algorithms using systems including bulk metal, metal surface, metal hydride, and an oxide cluster. The results demonstrate that our optimizer effectively reduces the number of DFT force calls by 2-3 times in all test systems.

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基于不确定性的机器学习-DFT 混合框架,用于加速几何优化。
几何优化是化学、物理和材料科学领域计算模拟的重要工具。开发更高效、更可靠的算法来减少力评估的次数,将加快计算建模和材料发现的速度。在此,我们提出了一种基于德尔塔法的神经网络-密度泛函理论(DFT)混合优化器,以提高几何优化的计算效率。与之前的主动学习方法相比,我们的算法增加了两个关键特征:一个是包含力信息的修正德尔塔法,以提高不确定性估计的效率;另一个是基于神经网络计算出的赫塞斯矩阵的准牛顿方法;后者提高了临界点附近优化的稳定性。我们利用大块金属、金属表面、金属氢化物和氧化物簇等系统,将我们的优化器与常用的优化算法进行了比较。结果表明,在所有测试系统中,我们的优化器都能有效减少 2-3 倍的 DFT 力调用次数。
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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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