Pseudomonas huanghezhanensis sp. nov. and Pseudomonas fjordensis sp. nov., two novel species isolated from seawater of Arctic Kongsfjorden in the Ny-Ålesund area, Svalbard.
{"title":"<i>Pseudomonas huanghezhanensis</i> sp. nov. and <i>Pseudomonas fjordensis</i> sp. nov., two novel species isolated from seawater of Arctic Kongsfjorden in the Ny-Ålesund area, Svalbard.","authors":"Hui-Yan Ge, Yong-Qiang Hu, Yin-Xin Zeng, Zuo-Qi Wang, Wei Han, Ting Hu, Yu Du","doi":"10.1099/ijsem.0.006584","DOIUrl":null,"url":null,"abstract":"<p><p>Two Gram-stain-negative bacterial strains, BSw22131<sup>T</sup> and DMSP-1<sup>T</sup>, were isolated from seawater of Arctic Kongsfjorden in the Ny-Ålesund area, Svalbard. Strains BSw22131<sup>T</sup> and DMSP-1<sup>T</sup> were within the genus <i>Pseudomonas</i> and presented 98.1 and 99.8% 16S rRNA gene sequence similarity to <i>Pseudomonas piscicola</i> P50<sup>T</sup> and <i>Pseudomonas paracarnis</i> V5/DAB/2/5<sup>T</sup>, respectively. However, the results of multilocus sequence analysis (concatenated 16S rRNA, <i>gyrB</i>, <i>rpoB</i> and <i>rpoD</i> gene sequences) and whole-genome sequence analysis indicated that BSw22131<sup>T</sup> and DMSP-1<sup>T</sup> were most closely related to <i>Pseudomonas petrae</i> P2653<sup>T</sup> and <i>Pseudomonas lactis</i> DSM 29167<sup>T</sup>, respectively. The genome G+C contents of strains BSw22131<sup>T</sup> and DMSP-1<sup>T</sup> were 58.2 and 60.0%, respectively. The two isolates presented digital DNA-DNA hybridization and average nucleotide identity values of less than 70 and 96%, respectively, with type strain genomes of their close relatives. BSw22131<sup>T</sup> contained summed feature 3 (C<sub>16 : 1</sub> <i> ω6</i>c<i>/</i>C1<sub>6 : 1</sub> <i> ω7</i>c), C<sub>16 : 0</sub> and summed feature 8 (C<sub>18 : 1</sub> <i> ω6</i>c<i>/</i>C1<sub>8 : 1</sub> <i> ω7</i>c) as the major cellular fatty acids, whereas DMSP-1<sup>T</sup> contained an additional C<sub>17 : 0</sub>-cyclo as the major fatty acid. The major quinones of both strains were Q-9 (57.5-77.2%) and Q-8 (22.8-37.2%), and their major cellular polar lipids were diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol. BSw22131<sup>T</sup> could be differentiated from its related species by positive ornithine decarboxylase, esterase (C8) and l-rhamnose and d-fructose-6-PO<sub>4</sub> utilization, whereas DMSP-1<sup>T</sup> could be differentiated by positive acid phosphatase but negative <i>p</i>-hydroxyphenylacetic acid utilization. The two strains were negative for the reduction of nitrates but contained genes related to dimethylsulfoniopropionate catabolism. The results of the polyphasic taxonomy analysis revealed that strains BSw22131<sup>T</sup> and DMSP-1<sup>T</sup> represent two novel species of the genus <i>Pseudomonas</i>, for which the names <i>Pseudomonas huanghezhanensis</i> sp. nov. (type strain BSw22131<sup>T</sup> = CCTCC AB 2019135<sup>T</sup> = JCM 36635<sup>T</sup> = DSM 117336<sup>T</sup>) and <i>Pseudomonas fjordensis</i> sp. nov. (type strain DMSP-1<sup>T</sup> = CCTCC AB 2019124<sup>T</sup> = JCM 36636<sup>T</sup> = DSM 117337<sup>T</sup>) are proposed.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"74 11","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006584","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Two Gram-stain-negative bacterial strains, BSw22131T and DMSP-1T, were isolated from seawater of Arctic Kongsfjorden in the Ny-Ålesund area, Svalbard. Strains BSw22131T and DMSP-1T were within the genus Pseudomonas and presented 98.1 and 99.8% 16S rRNA gene sequence similarity to Pseudomonas piscicola P50T and Pseudomonas paracarnis V5/DAB/2/5T, respectively. However, the results of multilocus sequence analysis (concatenated 16S rRNA, gyrB, rpoB and rpoD gene sequences) and whole-genome sequence analysis indicated that BSw22131T and DMSP-1T were most closely related to Pseudomonas petrae P2653T and Pseudomonas lactis DSM 29167T, respectively. The genome G+C contents of strains BSw22131T and DMSP-1T were 58.2 and 60.0%, respectively. The two isolates presented digital DNA-DNA hybridization and average nucleotide identity values of less than 70 and 96%, respectively, with type strain genomes of their close relatives. BSw22131T contained summed feature 3 (C16 : 1 ω6c/C16 : 1 ω7c), C16 : 0 and summed feature 8 (C18 : 1 ω6c/C18 : 1 ω7c) as the major cellular fatty acids, whereas DMSP-1T contained an additional C17 : 0-cyclo as the major fatty acid. The major quinones of both strains were Q-9 (57.5-77.2%) and Q-8 (22.8-37.2%), and their major cellular polar lipids were diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol. BSw22131T could be differentiated from its related species by positive ornithine decarboxylase, esterase (C8) and l-rhamnose and d-fructose-6-PO4 utilization, whereas DMSP-1T could be differentiated by positive acid phosphatase but negative p-hydroxyphenylacetic acid utilization. The two strains were negative for the reduction of nitrates but contained genes related to dimethylsulfoniopropionate catabolism. The results of the polyphasic taxonomy analysis revealed that strains BSw22131T and DMSP-1T represent two novel species of the genus Pseudomonas, for which the names Pseudomonas huanghezhanensis sp. nov. (type strain BSw22131T = CCTCC AB 2019135T = JCM 36635T = DSM 117336T) and Pseudomonas fjordensis sp. nov. (type strain DMSP-1T = CCTCC AB 2019124T = JCM 36636T = DSM 117337T) are proposed.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
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