Unusual Hydrophobic Property of Blue Fluorescent Amino Acid 4-Cyanotryptophan.

IF 4.8 2区 化学 Q2 CHEMISTRY, PHYSICAL The Journal of Physical Chemistry Letters Pub Date : 2024-11-15 DOI:10.1021/acs.jpclett.4c02842
Manxi Wang, Bo Zhuang, Kailin Tang, Ran-Ran Feng, Feng Gai
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Abstract

It is a common belief that the negative heat capacity change (ΔCp) associated with protein folding, which is a manifestation of the hydrophobic effect, results from a decrease in the solvent accessible hydrophobic surface area. Herein, we investigate the conformational energy landscape and dynamics of a tetrapeptide composed of two glycine and two 4-cyanotryptophan residues using time-resolved fluorescence spectroscopy, molecular dynamics simulations, and density functional theory calculations and find that, contrary to this expectation, the hydrophobic association of two 4-cyanotryptophan side chains leads to a positive ΔCp (approximately 543 J K-1 mol-1). Furthermore, we find that promoting one of the 4-cyanotryptophans to its excited electronic state strengthens this self-association. Taken together, our results provide not only insight into how modification of an aromatic amino acid can affect its hydrophobicity but also a potential strategy for designing protein sequences that can fold (unfold) at high (low) temperatures.

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蓝色荧光氨基酸 4-Cyanotryptophan 的非同寻常的疏水性。
人们普遍认为,与蛋白质折叠相关的负热容量变化(ΔCp)是疏水效应的一种表现形式,它是由于溶剂可接触的疏水表面积减少而产生的。在本文中,我们利用时间分辨荧光光谱、分子动力学模拟和密度泛函理论计算研究了由两个甘氨酸和两个 4-氰基色氨酸残基组成的四肽的构象能谱和动力学,结果发现,与预期相反,两个 4-氰基色氨酸侧链的疏水关联会导致正的ΔCp(约 543 J K-1 mol-1)。此外,我们还发现,促进其中一个 4-氰基色氨酸进入其激发电子态会加强这种自结合。综上所述,我们的研究结果不仅深入揭示了芳香族氨基酸的修饰如何影响其疏水性,而且还为设计能在高温(低温)条件下折叠(展开)的蛋白质序列提供了一种潜在的策略。
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来源期刊
The Journal of Physical Chemistry Letters
The Journal of Physical Chemistry Letters CHEMISTRY, PHYSICAL-NANOSCIENCE & NANOTECHNOLOGY
CiteScore
9.60
自引率
7.00%
发文量
1519
审稿时长
1.6 months
期刊介绍: The Journal of Physical Chemistry (JPC) Letters is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, chemical physicists, physicists, material scientists, and engineers. An important criterion for acceptance is that the paper reports a significant scientific advance and/or physical insight such that rapid publication is essential. Two issues of JPC Letters are published each month.
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