Computational Characterization of the DAD Photoisomerization: Functionalization, Protonation, and Solvation Effects.

IF 2.8 2区 化学 Q3 CHEMISTRY, PHYSICAL The Journal of Physical Chemistry B Pub Date : 2024-11-16 DOI:10.1021/acs.jpcb.4c05179
Lucía López-Pacios, Juan J Nogueira, Lara Martínez-Fernández
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Abstract

Photoswitches are becoming increasingly popular in pharmacology due to the possibility of modifying their activity with light. Hence, it is crucial to understand the photophysics of these compounds to identify promising light-activated drugs. We focused our study on DAD, an azobenzene derivative that, according to a previous experimental investigation, can restore visual function in blind mice due to trans-cis photoisomerization upon light absorption. With the present computational study, we aim to characterize the absorption spectrum of DAD, and to understand its photoisomerization mechanism by means of conformational search analysis, quantum mechanical (QM) and hybrid QM/continuum calculations, and classical molecular dynamics simulations. Moreover, we explored the effect of the derivation (DAD vs azobenzene), the protonation (DAD vs DADH22+, the two possible protonation states) and the solvation (vacuum vs water) on the photoisomerization. Similarly to azobenzene, we showed that the photoisomerization of both protonation states of DAD begin with the population of the bright S2 state. Then, it crosses to the S1 surface and relaxes along the rotation of the azo dihedral to a S1/S0 crossing point. The latter is close to a transition state that connects the trans and cis geometries on the ground state. Finally, our results suggested that amino derivation, nonprotonation and water solvation could improve the quantum yield of the photoisomerization.

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DAD 光异构化的计算特征:官能化、质子化和溶解效应。
由于可以用光来改变光开关的活性,光开关在药理学中越来越受欢迎。因此,了解这些化合物的光物理特性对于确定有前景的光激活药物至关重要。我们的研究重点是 DAD,它是一种偶氮苯衍生物,根据之前的实验研究,由于反式-顺式光异构化作用,DAD 可以恢复失明小鼠的视觉功能。本计算研究旨在通过构象搜索分析、量子力学(QM)和混合 QM/continuum 计算以及经典分子动力学模拟,确定 DAD 的吸收光谱特征,并了解其光异构化机制。此外,我们还探讨了衍生(DAD 与偶氮苯)、质子化(DAD 与 DADH22+,两种可能的质子化状态)和溶解(真空与水)对光异构化的影响。与偶氮苯类似,我们发现 DAD 的两种质子态的光异构化都是从明亮的 S2 态开始的。然后,它交叉到 S1 表面,并沿着偶氮二面体的旋转放松到 S1/S0 交叉点。后者接近于连接基态上反式和顺式几何结构的过渡态。最后,我们的研究结果表明,氨基衍生、非质子化和水溶解可以提高光异构化的量子产率。
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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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