Deciphering the anthocyanin metabolism gene network in tea plant (Camellia sinensis) through structural equation modeling.

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY BMC Genomics Pub Date : 2024-11-15 DOI:10.1186/s12864-024-11012-8
Pan Xia, Mei Chen, Linbo Chen, Yijian Yang, Ling Ma, Pinpin Bi, Song Tang, Qiongxian Luo, Jiwei Chen, Hongwei Chen, Hongling Zhang
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Abstract

Background: Tea is an important cash crop that significantly contributes to rural development, poverty reduction and food security in many developing countries. It provides livelihoods for millions of smallholder producers and aids their economic stability. Anthocyanins in tea leaves provides excellent commercial quality and germplasm exploration potential. These compounds give tea leaves vibrant colors and increase health benefits. The current understanding of the synergistic regulation mechanisms responsible for color changes in purple tea, attributed to anthocyanin degradation, remains unclear.

Results: In this study, we have identified 30 gene families within the genome that are associated to with anthocyanin metabolism from tea. These gene families play distinct roles in the biosynthesis of anthocyanin including the formation of the core, structure, modification of the molecular framework, facilitation of transport process, regulation of gene expression, breakdown pathways, sugar transportation and iron ion respectively. Subsequently, we investigated the synergistic mechanisms of anthocyanin metabolism related gene families within tea leaves using structural equation modeling. The results showed that sugar transport positively affects anthocyanin transportation, and promotes anthocyanin degradation during leaf pigmentation, whereas, it inhibits anthocyanin degradation during the fading of leaf color. Further, Iron ions facilitate the degradation of anthocyanins during their deposition and conversely, impede this degradation process during digestion. These finding suggests that tea plants may regulate the synthesis and degradation of anthocyanins through sugar transport and iron ions ensure healthy levels and vibrant colors.

Conclusions: Our study contributes valuable information into the dynamic equilibrium anthocyanin mechanism and sheds light on complex regulatory mechanisms that govern the synthesis, transport and degradation of these pigments. These insights could be further used to develop strategies for enhancing anthocyanins content in unique tea germplasm to aid tea industry in producing new tea products with increased health benefits and aesthetic appeals.

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通过结构方程模型解密茶树花青素代谢基因网络
背景:茶叶是一种重要的经济作物,对许多发展中国家的农村发展、减贫和粮食安全做出了重大贡献。它为数百万小农生产者提供了生计,并有助于他们的经济稳定。茶叶中的花青素具有优良的商业品质和种质发掘潜力。这些化合物赋予茶叶鲜艳的色彩,并增加了健康益处。目前对花青素降解导致紫茶颜色变化的协同调控机制仍不清楚:在这项研究中,我们在基因组中发现了 30 个与茶叶花青素代谢相关的基因家族。这些基因家族在花青素的生物合成过程中发挥着不同的作用,包括核心的形成、结构、分子框架的改变、运输过程的促进、基因表达的调控、分解途径、糖运输和铁离子。随后,我们利用结构方程模型研究了茶叶中花青素代谢相关基因家族的协同机制。结果表明,糖运输对花青素运输有正向影响,在叶片色素沉着过程中促进花青素降解,而在叶片色素褪色过程中抑制花青素降解。此外,铁离子在花青素沉积过程中促进花青素降解,反之,在消化过程中阻碍花青素降解。这些发现表明,茶树可能通过糖运输和铁离子来调节花青素的合成和降解,从而确保花青素的健康水平和鲜艳的颜色:我们的研究为花青素的动态平衡机制提供了有价值的信息,并揭示了这些色素合成、运输和降解的复杂调控机制。这些见解可进一步用于开发提高独特茶叶种质中花青素含量的策略,以帮助茶叶行业生产具有更多健康益处和美学吸引力的新茶产品。
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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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