Assessment of Protein Profile ın Vitreous Samples of Patients with Epiretinal Membrane by Proteomic Approaches.

IF 3 2区 医学 Q1 OPHTHALMOLOGY Experimental eye research Pub Date : 2024-11-15 DOI:10.1016/j.exer.2024.110160
Fatma Sumer, Berna Ozkan, V Levent Karabas, Gurler Akpinar, Murat Kasap
{"title":"Assessment of Protein Profile ın Vitreous Samples of Patients with Epiretinal Membrane by Proteomic Approaches.","authors":"Fatma Sumer, Berna Ozkan, V Levent Karabas, Gurler Akpinar, Murat Kasap","doi":"10.1016/j.exer.2024.110160","DOIUrl":null,"url":null,"abstract":"<p><p>This study aims to characterize idiopathic epiretinal membrane (iERM) using proteomic analysis to enhance diagnosis and treatment strategies. In a prospective case-control clinical trial, vitreous fluids (VF) from twelve iERM patients were collected during surgery and analyzed by 2DE-based MALDI TOF-TOF MS/MS. PANTHER and STRING analyses were performed to investigate the biological relationships between the identified proteins and to determine relevant cellular pathways. A total of 148 proteins were identified, including 24 that were unique to iERM. Grouping the proteins by biological processes revealed that most were involved in cell adhesion (n = 6), proteolysis (n = 10), and complement activation (n = 8). Compared to control VF, 12 proteins were upregulated and 12 downregulated in iERM VF, with the differentially expressed proteins strongly associated with inflammation. Proteomic analysis highlighted complement and inflammatory proteins as potential biomarkers or therapeutic targets for iERM. Given that inflammation and fibrosis play critical roles in iERM, further investigation into these differential proteins holds significant clinical relevance. Despite the challenge of recruiting suitable patients, we believe the results of this study provide a valuable foundation for future research.</p>","PeriodicalId":12177,"journal":{"name":"Experimental eye research","volume":" ","pages":"110160"},"PeriodicalIF":3.0000,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Experimental eye research","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1016/j.exer.2024.110160","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"OPHTHALMOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

This study aims to characterize idiopathic epiretinal membrane (iERM) using proteomic analysis to enhance diagnosis and treatment strategies. In a prospective case-control clinical trial, vitreous fluids (VF) from twelve iERM patients were collected during surgery and analyzed by 2DE-based MALDI TOF-TOF MS/MS. PANTHER and STRING analyses were performed to investigate the biological relationships between the identified proteins and to determine relevant cellular pathways. A total of 148 proteins were identified, including 24 that were unique to iERM. Grouping the proteins by biological processes revealed that most were involved in cell adhesion (n = 6), proteolysis (n = 10), and complement activation (n = 8). Compared to control VF, 12 proteins were upregulated and 12 downregulated in iERM VF, with the differentially expressed proteins strongly associated with inflammation. Proteomic analysis highlighted complement and inflammatory proteins as potential biomarkers or therapeutic targets for iERM. Given that inflammation and fibrosis play critical roles in iERM, further investigation into these differential proteins holds significant clinical relevance. Despite the challenge of recruiting suitable patients, we believe the results of this study provide a valuable foundation for future research.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
用蛋白质组学方法评估视网膜外膜患者玻璃体样本中的蛋白质概况
本研究旨在利用蛋白质组学分析来描述特发性视网膜外膜(iERM)的特征,从而改进诊断和治疗策略。在一项前瞻性病例对照临床试验中,研究人员在手术过程中采集了12名特发性视网膜外膜(iERM)患者的玻璃体液(VF),并通过基于2DE的MALDI TOF-TOF MS/MS进行了分析。为了研究鉴定出的蛋白质之间的生物学关系并确定相关的细胞通路,进行了 PANTHER 和 STRING 分析。共鉴定出 148 个蛋白质,包括 24 个 iERM 独有的蛋白质。按生物学过程对蛋白质进行分组后发现,大多数蛋白质参与了细胞粘附(6 个)、蛋白水解(10 个)和补体激活(8 个)。与对照组相比,iERM VF中有12种蛋白质上调,12种下调,其中表达不同的蛋白质与炎症密切相关。蛋白质组分析强调补体和炎症蛋白是 iERM 的潜在生物标记物或治疗靶点。鉴于炎症和纤维化在 iERM 中起着关键作用,进一步研究这些差异蛋白具有重要的临床意义。尽管招募合适的患者是一项挑战,但我们相信这项研究的结果为未来的研究奠定了宝贵的基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Experimental eye research
Experimental eye research 医学-眼科学
CiteScore
6.80
自引率
5.90%
发文量
323
审稿时长
66 days
期刊介绍: The primary goal of Experimental Eye Research is to publish original research papers on all aspects of experimental biology of the eye and ocular tissues that seek to define the mechanisms of normal function and/or disease. Studies of ocular tissues that encompass the disciplines of cell biology, developmental biology, genetics, molecular biology, physiology, biochemistry, biophysics, immunology or microbiology are most welcomed. Manuscripts that are purely clinical or in a surgical area of ophthalmology are not appropriate for submission to Experimental Eye Research and if received will be returned without review.
期刊最新文献
Complement C3 knockout protects photoreceptors in the sodium iodate model. Assessment of Protein Profile ın Vitreous Samples of Patients with Epiretinal Membrane by Proteomic Approaches. Monochromatic light effects on refractive error, cone cell density and retinoic acid signaling in dorsal and ventral retina in guinea pigs Deferiprone protects photoreceptors by inhibiting ferroptosis after experimental retinal detachment. SN promote retinal pathological neovascularization through activation of EGFR, IR and IGF-1R.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1