Uncovering the predictive and immunomodulatory potential of transient receptor potential melastatin family-related CCNE1 in pan-cancer.

IF 27.7 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Cancer Pub Date : 2024-11-18 DOI:10.1186/s12943-024-02169-7
Nan Zhang, Hao Zhang, Shuyu Li, Wantao Wu, Peng Luo, Zaoqu Liu, Yu Chen, Zhiwei Xia, Chenshen Huang, Quan Cheng
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Abstract

Millions of new cases of cancer are diagnosed worldwide each year, making it a serious public health concern. Developments in customized therapy and early detection have significantly enhanced treatment for and results from cancer. Therefore, it is important to investigate new molecular biomarkers. In this study, we created an efficient transient receptor potential melastatin (TRPM) family members-related TRPM-Score for 17 solid tumors. CCNE1, produced from TRPM-Score, was found to be an exceptional biomarker through several sophisticated machine learning and deep learning computational techniques. TRPM-Score and CCNE1 immunotherapeutic prediction, immunological characteristics, and predictive value were thoroughly assessed. In most cancer types, CCNE1 was a substantially dangerous marker. Additional in vitro tests validated CCNE1's immunomodulatory properties, demonstrating that silencing impeded macrophage movement and decreased PD-L1 expression. Additionally, CCNE1 may accurately predict responses to cancer immunotherapy. These findings indicate that the TRPM family-particularly CCNE1, which is associated with TRPM-is a significant player in the pan-cancer domain and can be utilized as a therapeutic target and prognostic biomarkers, especially in immuno-oncology. The thorough characterization of the TRPM family and the discovery of CCNE1 as a crucial downstream effector mark important developments in our comprehension of pan-cancer biology.

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揭示瞬时受体电位美司他丁家族相关 CCNE1 在泛癌症中的预测和免疫调节潜力。
全世界每年新增数百万例癌症病例,成为严重的公共卫生问题。定制疗法和早期检测的发展大大提高了癌症的治疗效果。因此,研究新的分子生物标志物非常重要。在这项研究中,我们为 17 种实体瘤创建了有效的瞬时受体电位美司他汀(TRPM)家族成员相关 TRPM-Score 。通过几种复杂的机器学习和深度学习计算技术,我们发现由 TRPM-Score 生成的 CCNE1 是一种特殊的生物标记物。研究人员对TRPM-Score和CCNE1的免疫治疗预测、免疫学特征和预测价值进行了全面评估。在大多数癌症类型中,CCNE1都是一个非常危险的标志物。其他体外测试也验证了CCNE1的免疫调节特性,证明沉默会阻碍巨噬细胞的移动并降低PD-L1的表达。此外,CCNE1 还能准确预测对癌症免疫疗法的反应。这些研究结果表明,TRPM家族,特别是与TRPM相关的CCNE1,在泛癌症领域发挥着重要作用,可被用作治疗靶点和预后生物标志物,尤其是在免疫肿瘤学领域。对TRPM家族的深入研究以及发现CCNE1是一个重要的下游效应因子,标志着我们在理解泛癌症生物学方面取得了重要进展。
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来源期刊
Molecular Cancer
Molecular Cancer 医学-生化与分子生物学
CiteScore
54.90
自引率
2.70%
发文量
224
审稿时长
2 months
期刊介绍: Molecular Cancer is a platform that encourages the exchange of ideas and discoveries in the field of cancer research, particularly focusing on the molecular aspects. Our goal is to facilitate discussions and provide insights into various areas of cancer and related biomedical science. We welcome articles from basic, translational, and clinical research that contribute to the advancement of understanding, prevention, diagnosis, and treatment of cancer. The scope of topics covered in Molecular Cancer is diverse and inclusive. These include, but are not limited to, cell and tumor biology, angiogenesis, utilizing animal models, understanding metastasis, exploring cancer antigens and the immune response, investigating cellular signaling and molecular biology, examining epidemiology, genetic and molecular profiling of cancer, identifying molecular targets, studying cancer stem cells, exploring DNA damage and repair mechanisms, analyzing cell cycle regulation, investigating apoptosis, exploring molecular virology, and evaluating vaccine and antibody-based cancer therapies. Molecular Cancer serves as an important platform for sharing exciting discoveries in cancer-related research. It offers an unparalleled opportunity to communicate information to both specialists and the general public. The online presence of Molecular Cancer enables immediate publication of accepted articles and facilitates the presentation of large datasets and supplementary information. This ensures that new research is efficiently and rapidly disseminated to the scientific community.
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