LncRNA RNF144A-AS1 gene polymorphisms and their influence on lung cancer patients in the Chinese Han population

IF 5.9 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Non-coding RNA Research Pub Date : 2024-11-09 DOI:10.1016/j.ncrna.2024.10.008
Hongjiao Wu , Yuning Xie , Ang Li , Xiyao Liu , Liwen Guo , Fengjun Wu , Zhenbang Yang , Zhi Zhang , Xuemei Zhang
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Abstract

Lung cancer is primarily classified as NSCLC, which is distinguished by a wide range of genetic variations. This study focused on RNF144A-AS1, a relatively unexplored lncRNA, to explore the impact of its genetic polymorphisms on the susceptibility to NSCLC. We detected RNF144A-AS1 expression and its correlation with prognosis and clinical pathological features using bioinformatics analysis. The association between RNF144A-AS1 polymorphism and NSCLC susceptibility was evaluated using case-control methods. This investigation featured a cohort of 700 NSCLC individuals and 700 healthy controls. The genotype of genetic variation was detected by PCR-RFLP and iMLDR, followed by subsequent calculation of OR and 95 % CI. Our data show that RNF144A-AS1 exhibits high expression levels in LUAD tissues and its expression is closely linked to LUAD progression and prognosis. Carrier of RNF144A-AS1 rs3806609 TT genotype increased NSCLC susceptibility compared to carrier of rs3806609 CC genotype (OR = 2.21, 95%CI = 1.57–3.13). Our study identifies RNF144A-AS1 genetic variants as potential susceptibility markers in NSCLC. RNF144A-AS1 promotes cell proliferation and migration in LUAD through the IFN-γ/JAK2/STAT1 signalling pathway. Collectively, these findings pave the way for developing targeted therapies and diagnostic tools based on RNF144A-AS1 and its variants.
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LncRNA RNF144A-AS1 基因多态性及其对中国汉族人群肺癌患者的影响
肺癌主要分为NSCLC,其遗传变异范围很广。本研究以RNF144A-AS1这一尚未被研究的lncRNA为研究对象,探讨其基因多态性对NSCLC易感性的影响。我们通过生物信息学分析检测了RNF144A-AS1的表达及其与预后和临床病理特征的相关性。采用病例对照方法评估了RNF144A-AS1多态性与NSCLC易感性之间的关联。这项调查以 700 名 NSCLC 患者和 700 名健康对照者为研究对象。通过 PCR-RFLP 和 iMLDR 检测遗传变异的基因型,然后计算 OR 和 95 % CI。我们的数据显示,RNF144A-AS1在LUAD组织中呈现高表达水平,其表达与LUAD的进展和预后密切相关。与 rs3806609 CC 基因型携带者相比,RNF144A-AS1 rs3806609 TT 基因型携带者增加了 NSCLC 易感性(OR = 2.21,95%CI = 1.57-3.13)。我们的研究发现,RNF144A-AS1基因变异是NSCLC的潜在易感性标记。RNF144A-AS1通过IFN-γ/JAK2/STAT1信号通路促进LUAD中细胞的增殖和迁移。总之,这些发现为开发基于RNF144A-AS1及其变体的靶向疗法和诊断工具铺平了道路。
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来源期刊
Non-coding RNA Research
Non-coding RNA Research Medicine-Biochemistry (medical)
CiteScore
7.70
自引率
6.00%
发文量
39
审稿时长
49 days
期刊介绍: Non-coding RNA Research aims to publish high quality research and review articles on the mechanistic role of non-coding RNAs in all human diseases. This interdisciplinary journal will welcome research dealing with all aspects of non-coding RNAs-their biogenesis, regulation and role in disease progression. The focus of this journal will be to publish translational studies as well as well-designed basic studies with translational and clinical implications. The non-coding RNAs of particular interest will be microRNAs (miRNAs), small interfering RNAs (siRNAs), small nucleolar RNAs (snoRNAs), U-RNAs/small nuclear RNAs (snRNAs), exosomal/extracellular RNAs (exRNAs), Piwi-interacting RNAs (piRNAs) and long non-coding RNAs. Topics of interest will include, but not limited to: -Regulation of non-coding RNAs -Targets and regulatory functions of non-coding RNAs -Epigenetics and non-coding RNAs -Biological functions of non-coding RNAs -Non-coding RNAs as biomarkers -Non-coding RNA-based therapeutics -Prognostic value of non-coding RNAs -Pharmacological studies involving non-coding RNAs -Population based and epidemiological studies -Gene expression / proteomics / computational / pathway analysis-based studies on non-coding RNAs with functional validation -Novel strategies to manipulate non-coding RNAs expression and function -Clinical studies on evaluation of non-coding RNAs The journal will strive to disseminate cutting edge research, showcasing the ever-evolving importance of non-coding RNAs in modern day research and medicine.
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