Exploring human pancreatic organoid modelling through single-cell RNA sequencing analysis.

IF 5.2 1区 生物学 Q1 BIOLOGY Communications Biology Pub Date : 2024-11-18 DOI:10.1038/s42003-024-07193-3
Alessandro Cherubini, Francesco Rusconi, Roberta Piras, Kaja Nicole Wächtershäuser, Marta Dossena, Mario Barilani, Cecilia Mei, Lotta Hof, Valeria Sordi, Francesco Pampaloni, Vincenza Dolo, Lorenzo Piemonti, Lorenza Lazzari
{"title":"Exploring human pancreatic organoid modelling through single-cell RNA sequencing analysis.","authors":"Alessandro Cherubini, Francesco Rusconi, Roberta Piras, Kaja Nicole Wächtershäuser, Marta Dossena, Mario Barilani, Cecilia Mei, Lotta Hof, Valeria Sordi, Francesco Pampaloni, Vincenza Dolo, Lorenzo Piemonti, Lorenza Lazzari","doi":"10.1038/s42003-024-07193-3","DOIUrl":null,"url":null,"abstract":"<p><p>Human organoids have been proposed to be powerful tools mimicking the physiopathological processes of the organs of origin. Recently, human pancreatic organoids (hPOs) have gained increasing attention due to potential theragnostic and regenerative medicine applications. However, the cellular components of hPOs have not been defined precisely. In this work, we finely characterized these structures, focusing first on morphology and identity-defining molecular features under long-term culture conditions. Next, we focused our attention on hPOs cell type composition using single-cell RNA sequencing founding a complex heterogeneity in ductal components, ranging from progenitor components to terminally differentiated ducts. Furthermore, an extensive comparison of human pancreatic organoids with previously reported transcriptomics signature of human and mouse pancreatic ductal populations, confirmed the functional pancreatic duct subpopulation heterogeneity. Finally, we showed that pancreatic organoid cells follow a precise developmental trajectory and utilize diverse signalling mechanisms, including EGF and SPP1, to facilitate cell-cell communication and maturation. Together our results offer an in-depth description of human pancreatic organoids providing a strong foundation for future in vitro diagnostic and translational studies of pancreatic health and disease.</p>","PeriodicalId":10552,"journal":{"name":"Communications Biology","volume":"7 1","pages":"1527"},"PeriodicalIF":5.2000,"publicationDate":"2024-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11574267/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Communications Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1038/s42003-024-07193-3","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Human organoids have been proposed to be powerful tools mimicking the physiopathological processes of the organs of origin. Recently, human pancreatic organoids (hPOs) have gained increasing attention due to potential theragnostic and regenerative medicine applications. However, the cellular components of hPOs have not been defined precisely. In this work, we finely characterized these structures, focusing first on morphology and identity-defining molecular features under long-term culture conditions. Next, we focused our attention on hPOs cell type composition using single-cell RNA sequencing founding a complex heterogeneity in ductal components, ranging from progenitor components to terminally differentiated ducts. Furthermore, an extensive comparison of human pancreatic organoids with previously reported transcriptomics signature of human and mouse pancreatic ductal populations, confirmed the functional pancreatic duct subpopulation heterogeneity. Finally, we showed that pancreatic organoid cells follow a precise developmental trajectory and utilize diverse signalling mechanisms, including EGF and SPP1, to facilitate cell-cell communication and maturation. Together our results offer an in-depth description of human pancreatic organoids providing a strong foundation for future in vitro diagnostic and translational studies of pancreatic health and disease.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
通过单细胞 RNA 测序分析探索人类胰腺器官模型。
人体器官组织被认为是模仿原生器官生理病理过程的强大工具。最近,人体胰腺器官组织(hPOs)因其潜在的诊断和再生医学应用而受到越来越多的关注。然而,hPOs 的细胞成分尚未得到精确定义。在这项工作中,我们对这些结构进行了细致的表征,首先关注的是长期培养条件下的形态学和确定身份的分子特征。接着,我们利用单细胞 RNA 测序技术重点研究了 hPOs 的细胞类型组成,发现导管成分具有复杂的异质性,从祖细胞成分到终末分化的导管都有。此外,将人胰腺器官组织与之前报道的人和小鼠胰腺导管群体的转录组学特征进行广泛比较,证实了功能性胰腺导管亚群的异质性。最后,我们发现胰腺器官样细胞遵循精确的发育轨迹,并利用包括 EGF 和 SPP1 在内的多种信号机制促进细胞间的交流和成熟。我们的研究结果对人类胰腺器官组织进行了深入描述,为未来胰腺健康和疾病的体外诊断和转化研究奠定了坚实的基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Communications Biology
Communications Biology Medicine-Medicine (miscellaneous)
CiteScore
8.60
自引率
1.70%
发文量
1233
审稿时长
13 weeks
期刊介绍: Communications Biology is an open access journal from Nature Research publishing high-quality research, reviews and commentary in all areas of the biological sciences. Research papers published by the journal represent significant advances bringing new biological insight to a specialized area of research.
期刊最新文献
A novel in-silico model explores LanM homologs among Hyphomicrobium spp. Collective responses of flocking sheep (Ovis aries) to a herding dog (border collie). PLGA/BK microspheres targeting the bradykinin signaling pathway as a therapeutic strategy to delay intervertebral disc degeneration. An improved transcriptome annotation reveals asymmetric expression and distinct regulation patterns in allotetraploid common carp. Collateral nuclease activity of TnpB triggered by high temperature enables fast and sensitive nucleic acid detection.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1