Identification and computational chemistry analysis of anti-prostatic hyperplasia peptides from Syngnathus schlegeli.

IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Chemistry & Biodiversity Pub Date : 2024-11-19 DOI:10.1002/cbdv.202402158
Ailing Duan, Xinjian Qu, Qiang Lin, Geng Qin, Xiangtan Zhao, Si Li, Hua Chen, Xiangxi Yi, Peng Wan, Deke Chen, Bingna Cai, Jianyu Pan
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Abstract

Pipefish is traditionally used in Chinese folklore as a male tonic. Recent studies show that Syngnathus schlegeli extracts effectively combat benign prostatic hyperplasia (BPH). However, the specific active compounds involved and their mechanisms of action are not fully understood. This study aimed to investigate how pipefish peptides alleviate BPH using network pharmacology, molecular docking, and quantum chemical techniques. SN4, a gel-separated fraction from the neutral enzymatic hydrolysates of S. schlegeli, reveal 3470 peptide sequences, predominantly tetrapeptides enriched in Phe, Trp, Leu, and Ile. Network pharmacology identified SRC, AKT, and ITGB3 as primary targets. Molecular docking and in vitro tests on TP-induced RWPE-1 cell proliferation showed that peptides (FVDW, FIFE) were potentially active. In silico docking and quantum chemistry analysis showed that the N-terminal Phe linked to Ile/Val in FVDW and FIFE interacted with AKT1, ITGB3, and SRC proteins, enhancing ligand-receptor interactions and affinity, also highlighting their potential for improving BPH.

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从Syngnathus schlegeli中鉴定抗前列腺增生肽并进行计算化学分析。
琵琶鱼在中国民间传统上被用作男性滋补品。最近的研究表明,Syngnathus schlegeli 提取物可有效防治良性前列腺增生症(BPH)。然而,其中涉及的特定活性化合物及其作用机制尚未完全清楚。本研究旨在利用网络药理学、分子对接和量子化学技术研究琵琶鱼肽如何缓解良性前列腺增生症。SN4是从S. schlegeli的中性酶水解物中凝胶分离出来的馏分,它揭示了3470个肽序列,主要是富含Phe、Trp、Leu和Ile的四肽。网络药理学确定 SRC、AKT 和 ITGB3 为主要靶标。分子对接和对 TP 诱导的 RWPE-1 细胞增殖的体外测试表明,多肽(FVDW、FIFE)具有潜在的活性。硅学对接和量子化学分析表明,FVDW 和 FIFE 中与 Ile/Val 相连的 N 端 Phe 与 AKT1、ITGB3 和 SRC 蛋白相互作用,增强了配体与受体之间的相互作用和亲和力,这也凸显了它们在改善良性前列腺增生症方面的潜力。
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来源期刊
Chemistry & Biodiversity
Chemistry & Biodiversity 环境科学-化学综合
CiteScore
3.40
自引率
10.30%
发文量
475
审稿时长
2.6 months
期刊介绍: Chemistry & Biodiversity serves as a high-quality publishing forum covering a wide range of biorelevant topics for a truly international audience. This journal publishes both field-specific and interdisciplinary contributions on all aspects of biologically relevant chemistry research in the form of full-length original papers, short communications, invited reviews, and commentaries. It covers all research fields straddling the border between the chemical and biological sciences, with the ultimate goal of broadening our understanding of how nature works at a molecular level. Since 2017, Chemistry & Biodiversity is published in an online-only format.
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