Kexin Wang, Yang Liu, Xiaowen Cui, Tuo Chen, Guangxiu Liu, Wei Zhang, Zhiyong Han, Gaosen Zhang
{"title":"<i>Blastococcus montanus</i> sp. nov., a multi-stress-resistant and bacteriostatic-producing bacterium isolated from the Flaming Mountain, Xinjiang,China.","authors":"Kexin Wang, Yang Liu, Xiaowen Cui, Tuo Chen, Guangxiu Liu, Wei Zhang, Zhiyong Han, Gaosen Zhang","doi":"10.1099/ijsem.0.006546","DOIUrl":null,"url":null,"abstract":"<p><p>A bacterial strain designated HT6-4<sup>T</sup> was isolated from soil samples collected from the Flaming Mountain, Xinjiang, PR China. The purpose of this study was to describe a novel species and its characteristics, through genome sequencing and analysis of the relationship between the members of the genus <i>Blastococcus</i>, and explore the antiradiation, antioxidation and antibacterial capabilities of strain HT6-4<sup>T</sup>. The polyphasic study confirmed the affiliation of strain HT6-4<sup>T</sup> with the genus <i>Blastococcus</i>. Strain HT6-4<sup>T</sup> was aerobic, Gram-stain-positive, non-budding, non-motile, catalase-positive and oxidase-negative. It grew at 10-37 °C, pH 5.0-8.0 and 0-4% (w/v) NaCl. Colonies were circular, smooth and bright orange in colour. In addition, strain HT6-4<sup>T</sup> was drought tolerant. The predominant menaquinone was MK-9, with MK-8 as the minor component. The polar lipids of strain HT6-4<sup>T</sup> were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol, phospholipids, an unidentified aminolipid and two unidentified phospholipids. Whole-cell hydrolysates contain <i>meso</i>-diaminopimelic acid as the diagnostic diamino acid and ribose and galactose as diagnostic sugars. Its major fatty acids were iso-C<sub>16 : 0</sub>, C<sub>17 : 1</sub> <i>ω</i>8<i>c</i> and C<sub>18 : 1</sub> <i>ω</i>9<i>c</i>. The genome of strain HT6-4<sup>T</sup> was 4.30 Mb in the whole-genome shotgun project. The G+C content was 73.9 mol%. The phylogenetic analysis based on the 16S rRNA gene sequence showed that strain HT6-4<sup>T</sup> was closely related to <i>Blastococcus jejuensis</i> KST3-10<sup>T</sup>(97.9%), <i>Blastococcus capsensis</i> BMG 804<sup>T</sup>(97.8%), <i>Bl</i>astococcus <i>aggregatus</i> DSM 4725<sup>T</sup>(97.5%), <i>Blastococcus saxobsidens</i> BC 444<sup>T</sup>(97.5%), <i>Blastococcus xanthinilyticus</i> BMG 862<sup>T</sup>(97.5%) and <i>Blastococcus litoris</i> GP-S2-8<sup>T</sup>(97.5%). The average nucleotide identity (OrthoANI) and digital DNA-DNA hybridization (dDDH) values among strain HT6-4<sup>T</sup> and <i>B. jejuensis</i> KST3-10<sup>T</sup>, <i>B. capsensis</i> BMG 804<sup>T</sup>, <i>B. aggregatus</i> DSM 4725<sup>T</sup>, <i>B. saxobsidens</i> BC 444<sup>T</sup>, <i>B. xanthinilyticus</i> BMG 862<sup>T</sup> and <i>B. litoris</i> GP-S2-8<sup>T</sup> were below the species delimitation thresholds. The genome of strain HT6-4<sup>T</sup> contained antiradiation genes, antioxidant genes and antibacterial genes. Based on its morphological, physiological and chemical taxonomic characteristics, strain HT6-4<sup>T</sup> (=KCTC 59234<sup>T</sup> =GDMCC 1.4386<sup>T</sup>) should be classified as a novel species of the genus <i>Bl</i>astococcus with the proposed name <i>Blastococcus montanus</i> sp. nov.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"74 11","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006546","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
A bacterial strain designated HT6-4T was isolated from soil samples collected from the Flaming Mountain, Xinjiang, PR China. The purpose of this study was to describe a novel species and its characteristics, through genome sequencing and analysis of the relationship between the members of the genus Blastococcus, and explore the antiradiation, antioxidation and antibacterial capabilities of strain HT6-4T. The polyphasic study confirmed the affiliation of strain HT6-4T with the genus Blastococcus. Strain HT6-4T was aerobic, Gram-stain-positive, non-budding, non-motile, catalase-positive and oxidase-negative. It grew at 10-37 °C, pH 5.0-8.0 and 0-4% (w/v) NaCl. Colonies were circular, smooth and bright orange in colour. In addition, strain HT6-4T was drought tolerant. The predominant menaquinone was MK-9, with MK-8 as the minor component. The polar lipids of strain HT6-4T were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol, phospholipids, an unidentified aminolipid and two unidentified phospholipids. Whole-cell hydrolysates contain meso-diaminopimelic acid as the diagnostic diamino acid and ribose and galactose as diagnostic sugars. Its major fatty acids were iso-C16 : 0, C17 : 1ω8c and C18 : 1ω9c. The genome of strain HT6-4T was 4.30 Mb in the whole-genome shotgun project. The G+C content was 73.9 mol%. The phylogenetic analysis based on the 16S rRNA gene sequence showed that strain HT6-4T was closely related to Blastococcus jejuensis KST3-10T(97.9%), Blastococcus capsensis BMG 804T(97.8%), Blastococcus aggregatus DSM 4725T(97.5%), Blastococcus saxobsidens BC 444T(97.5%), Blastococcus xanthinilyticus BMG 862T(97.5%) and Blastococcus litoris GP-S2-8T(97.5%). The average nucleotide identity (OrthoANI) and digital DNA-DNA hybridization (dDDH) values among strain HT6-4T and B. jejuensis KST3-10T, B. capsensis BMG 804T, B. aggregatus DSM 4725T, B. saxobsidens BC 444T, B. xanthinilyticus BMG 862T and B. litoris GP-S2-8T were below the species delimitation thresholds. The genome of strain HT6-4T contained antiradiation genes, antioxidant genes and antibacterial genes. Based on its morphological, physiological and chemical taxonomic characteristics, strain HT6-4T (=KCTC 59234T =GDMCC 1.4386T) should be classified as a novel species of the genus Blastococcus with the proposed name Blastococcus montanus sp. nov.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.