QSAR, molecular docking, MD simulations, and ADMET screening identify potential Heliotropium indicum leads against key targets in benign prostatic hyperplasia.

In silico pharmacology Pub Date : 2024-11-19 eCollection Date: 2024-01-01 DOI:10.1007/s40203-024-00280-7
Emmanuel Sunday Omirin, Precious Oluwasanmi Aribisala, Ezekiel Abiola Olugbogi, Olawole Yakubu Adeniran, Sunday Adeola Emaleku, John Ayodeji Saliu, Oluwaseun Fapohunda, Abimbola Kikelomo Omirin, Mary Oyinlola Gbadamosi, Iheanyichukwu Wopara
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Abstract

Steroid 5α-reductase (5αR) converts testosterone into dihydrotestosterone (DHT), a potent androgen driving prostate cell proliferation via the androgen receptor (AR). Both 5αR and AR play crucial roles in androgen-mediated disorders, making them key therapeutic targets in drug development. Current treatments target these enzymes individually and often cause significant side effects, highlighting the need for safer alternatives. Through in silico screening, 13 pyrrolizidine alkaloids of Heliotropium indicum (HI) were assessed for their inhibitory potential against 5αR and AR. Using machine learning, six alkaloids showed promising pIC50 values. The accuracy of the models was assessed using key statistical parameters, including the score, correlation coefficient for training sets (R2), correlation coefficient for test sets (Q2), standard deviation (SD), and root mean square error (RMSE). For 5αR, the results were 0.763 (R2), 0.781 (Q2), 0.748 (score), 0.362 (SD), and 0.832 (RMSE), while for AR, the values were 0.817 (R2), 0.783 (Q2), 0.713 (score), 0.427 (SD), and 0.782 (RMSE), indicating reliability. Europine-N-oxide (-10.27 kcal/mol) and Heliotridine-N-oxide (-9.72 kcal/mol) displayed stronger 5αR binding than Finasteride, while Heliotrine (-10.09 kcal/mol) and Europine-N-oxide (-8.76 kcal/mol) outperformed Enzalutamide in AR binding. Key hydrogen bonds and MD simulations confirmed stable interactions. Pharmacokinetic screening revealed favorable drug-like profiles, including good solubility and absorption with minimal CYP enzyme inhibition. These findings suggest that HI alkaloids are promising multi-target inhibitors for BPH treatment, warranting further in vivo validation and optimization.

Supplementary information: The online version contains supplementary material available at 10.1007/s40203-024-00280-7.

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通过 QSAR、分子对接、MD 模拟和 ADMET 筛选,确定了针对良性前列腺增生关键靶点的潜在 Heliotropium indicum 引导物。
类固醇 5α 还原酶(5αR)将睾酮转化为双氢睾酮(DHT),DHT 是一种强效雄激素,通过雄激素受体(AR)驱动前列腺细胞增殖。5αR 和 AR 在雄激素介导的疾病中都起着至关重要的作用,因此成为药物开发中的关键治疗靶点。目前的治疗方法单独针对这些酶,往往会产生严重的副作用,因此需要更安全的替代品。通过硅学筛选,我们评估了 Heliotropium indicum(HI)的 13 种吡咯烷生物碱对 5αR 和 AR 的抑制潜力。通过机器学习,有六种生物碱显示出良好的 pIC50 值。模型的准确性通过关键的统计参数进行评估,包括得分、训练集相关系数(R2)、测试集相关系数(Q2)、标准偏差(SD)和均方根误差(RMSE)。对于 5αR,结果分别为 0.763(R2)、0.781(Q2)、0.748(得分)、0.362(标清)和 0.832(均方根误差);而对于 AR,结果分别为 0.817(R2)、0.783(Q2)、0.713(得分)、0.427(标清)和 0.782(均方根误差),这表明结果是可靠的。与非那雄胺相比,Europine-N-氧化物(-10.27 kcal/mol)和Heliotridine-N-氧化物(-9.72 kcal/mol)显示出更强的5αR结合力,而Heliotrine(-10.09 kcal/mol)和Europine-N-氧化物(-8.76 kcal/mol)在AR结合力方面优于恩杂鲁胺。关键氢键和 MD 模拟证实了稳定的相互作用。药代动力学筛选显示了良好的类药物特征,包括良好的溶解性和吸收性,以及最小的 CYP 酶抑制。这些发现表明,HI 生物碱是治疗良性前列腺增生症的有前途的多靶点抑制剂,值得进一步进行体内验证和优化:在线版本包含补充材料,可查阅 10.1007/s40203-024-00280-7。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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