The Future of Surgical Diagnostics: AI-Enhanced Detection of Ganglion Cells for Hirschsprung Disease.

IF 5.1 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Laboratory Investigation Pub Date : 2024-11-20 DOI:10.1016/j.labinv.2024.102189
Derya Demir, Kutsev Bengisu Ozyoruk, Yasin Durusoy, Ezgi Cinar, Gurdeniz Serin, Kayhan Basak, Emre Cagatay Kose, Malik Ergin, Murat Sezak, G Evren Keles, Sergulen Dervisoglu, Basak Doganavsargil Yakut, Yavuz Nuri Ertas, Feras Alaqad, Mehmet Turan
{"title":"The Future of Surgical Diagnostics: AI-Enhanced Detection of Ganglion Cells for Hirschsprung Disease.","authors":"Derya Demir, Kutsev Bengisu Ozyoruk, Yasin Durusoy, Ezgi Cinar, Gurdeniz Serin, Kayhan Basak, Emre Cagatay Kose, Malik Ergin, Murat Sezak, G Evren Keles, Sergulen Dervisoglu, Basak Doganavsargil Yakut, Yavuz Nuri Ertas, Feras Alaqad, Mehmet Turan","doi":"10.1016/j.labinv.2024.102189","DOIUrl":null,"url":null,"abstract":"<p><p>Hirschsprung disease (HD), a congenital disease characterized by the absence of ganglion cells, presents significant surgical challenges. Addressing a critical gap in intraoperative diagnostics, we introduce transformative artificial-intelligence (AI) approach that significantly enhances the detection of ganglion cells in frozen-sections (FSs). The dataset comprises 366 frozen and 302 formalin-fixed-paraffin-embedded (FFPE) hematoxylin and eosin-stained slides obtained from 164 patients from three centers. Three pathologists annotated the ganglion cells on the whole-slide-images (WSIs) using bounding boxes. Tissue regions within WSIs were segmented and split into patches of 2000x2000 pixels. A deep-learning pipeline utilizing ResNet-50 model for feature extraction and Grad-CAM algorithm to generate heatmaps for ganglion cell localization was employed. The binary classification performance of the model was evaluated on independent test cohorts. In the multi-reader study, 10-pathologists assessed 50-frozen WSIs, with 25-slides containing ganglion cells, and 25-slides without. In the first phase of the study, pathologists evaluated the slides as in their routine practice. After two-week washout period, pathologists reevaluated the same WSIs along with the four patches with the highest probability of containing ganglion cells. The proposed deep-learning approach achieved an accuracy of 91.3%, 92.8%, 90.1% in detecting ganglion cells within WSIs in the test dataset obtained from centers. In the reader study, on average, the pathologists' diagnostic accuracy increased from 77% to 85.8% with the model's heatmap support while the diagnosis time decreased from an average of 139.7 seconds to 70.5 seconds. Notably, when applied in real-world settings with group of pathologists, our model's integration brought about substantial improvement in diagnosis precision and reduced the time required for diagnoses by half. This notable advance in AI-driven diagnostics not only sets new-standard for surgical decision-making in HD but also creates opportunities for its wider implementation in various clinical settings, highlighting its pivotal role in enhancing the efficacy and accuracy of FS analyses.</p>","PeriodicalId":17930,"journal":{"name":"Laboratory Investigation","volume":" ","pages":"102189"},"PeriodicalIF":5.1000,"publicationDate":"2024-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Laboratory Investigation","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1016/j.labinv.2024.102189","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MEDICINE, RESEARCH & EXPERIMENTAL","Score":null,"Total":0}
引用次数: 0

Abstract

Hirschsprung disease (HD), a congenital disease characterized by the absence of ganglion cells, presents significant surgical challenges. Addressing a critical gap in intraoperative diagnostics, we introduce transformative artificial-intelligence (AI) approach that significantly enhances the detection of ganglion cells in frozen-sections (FSs). The dataset comprises 366 frozen and 302 formalin-fixed-paraffin-embedded (FFPE) hematoxylin and eosin-stained slides obtained from 164 patients from three centers. Three pathologists annotated the ganglion cells on the whole-slide-images (WSIs) using bounding boxes. Tissue regions within WSIs were segmented and split into patches of 2000x2000 pixels. A deep-learning pipeline utilizing ResNet-50 model for feature extraction and Grad-CAM algorithm to generate heatmaps for ganglion cell localization was employed. The binary classification performance of the model was evaluated on independent test cohorts. In the multi-reader study, 10-pathologists assessed 50-frozen WSIs, with 25-slides containing ganglion cells, and 25-slides without. In the first phase of the study, pathologists evaluated the slides as in their routine practice. After two-week washout period, pathologists reevaluated the same WSIs along with the four patches with the highest probability of containing ganglion cells. The proposed deep-learning approach achieved an accuracy of 91.3%, 92.8%, 90.1% in detecting ganglion cells within WSIs in the test dataset obtained from centers. In the reader study, on average, the pathologists' diagnostic accuracy increased from 77% to 85.8% with the model's heatmap support while the diagnosis time decreased from an average of 139.7 seconds to 70.5 seconds. Notably, when applied in real-world settings with group of pathologists, our model's integration brought about substantial improvement in diagnosis precision and reduced the time required for diagnoses by half. This notable advance in AI-driven diagnostics not only sets new-standard for surgical decision-making in HD but also creates opportunities for its wider implementation in various clinical settings, highlighting its pivotal role in enhancing the efficacy and accuracy of FS analyses.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
手术诊断的未来:用人工智能增强神经节细胞检测赫氏腓肠肌病。
赫氏病(HD)是一种以神经节细胞缺失为特征的先天性疾病,给外科手术带来了巨大挑战。为了弥补术中诊断的不足,我们引入了变革性的人工智能(AI)方法,大大提高了冰冻切片(FSs)中神经节细胞的检测能力。数据集包括来自三个中心 164 名患者的 366 张冰冻切片和 302 张福尔马林固定-石蜡包埋(FFPE)苏木精和伊红染色切片。三位病理学家使用边界框标注了整张切片图像(WSI)上的神经节细胞。对 WSI 中的组织区域进行分割,并将其分成 2000x2000 像素的片段。利用 ResNet-50 模型进行特征提取,并采用 Grad-CAM 算法生成神经节细胞定位的热图,从而建立了一个深度学习管道。该模型的二元分类性能在独立的测试组群中进行了评估。在多人阅读研究中,10 位病理学家评估了 50 张冷冻的 WSI,其中 25 张含有神经节细胞,25 张不含有神经节细胞。在研究的第一阶段,病理学家按照常规方法对切片进行评估。经过两周的冲洗期后,病理学家重新评估了相同的 WSI 以及含有神经节细胞概率最高的四个斑块。在从各中心获得的测试数据集中,所提出的深度学习方法在检测 WSI 中的神经节细胞方面的准确率分别达到了 91.3%、92.8% 和 90.1%。在读者研究中,在模型的热图支持下,病理学家的诊断准确率平均从 77% 提高到 85.8%,而诊断时间则从平均 139.7 秒缩短到 70.5 秒。值得注意的是,在病理学家小组的实际环境中应用时,我们的模型集成大大提高了诊断精度,并将诊断所需时间缩短了一半。人工智能驱动诊断的这一显著进步不仅为高清手术决策设定了新标准,还为其在各种临床环境中的广泛应用创造了机会,凸显了其在提高 FS 分析的有效性和准确性方面的关键作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Laboratory Investigation
Laboratory Investigation 医学-病理学
CiteScore
8.30
自引率
0.00%
发文量
125
审稿时长
2 months
期刊介绍: Laboratory Investigation is an international journal owned by the United States and Canadian Academy of Pathology. Laboratory Investigation offers prompt publication of high-quality original research in all biomedical disciplines relating to the understanding of human disease and the application of new methods to the diagnosis of disease. Both human and experimental studies are welcome.
期刊最新文献
The Future of Surgical Diagnostics: AI-Enhanced Detection of Ganglion Cells for Hirschsprung Disease. CD248 cleaved form in human colorectal cancer stroma: implications for tumor behavior and prognosis. Lymph node metastasis prediction from in-situ lung squamous cell carcinoma histopathology images using deep learning. Spatial lipidomics reveals myelin defects and pro-tumor macrophage infiltration in MPNST adjacent nerves. SWI/SNF deficient tumors - morphology, immunophenotype, genetics, epigenetics, nosology and therapy.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1