A review on salt-induced DNA compaction and charge inversion.

IF 3.2 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Progress in Biophysics & Molecular Biology Pub Date : 2024-11-20 DOI:10.1016/j.pbiomolbio.2024.11.003
Khadka B Chhetri
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Abstract

This review delves into the reversible process of DNA compaction, vital for cellular functions like replication and transcription. The study highlights how various cations assist in the condensation of DNA chains, highlighting their specificity. The impact of the ionic environment on chromatin characteristics is discussed, emphasizing the roles of mono- and divalent cations in neutralizing DNA charge and promoting compaction. Trivalent ions induce significant compaction, while divalent ions also contribute, albeit less strongly. Charge inversion, facilitated by high concentrations of multivalent counterions, affects DNA condensation dynamics. Manipulating solution pH and dielectric constant can alter charge inversion bidirectionally. The hydrophobic effect driven by organic cations plays a crucial role in DNA compaction. The review underscores the implications of charge inversion, including macroscopic phase separation and DNA precipitation, driven by the binding of cationic micelles to DNA.

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盐诱导 DNA 压实和电荷反转综述
这篇综述深入探讨了对复制和转录等细胞功能至关重要的 DNA 可逆压缩过程。研究强调了各种阳离子如何协助 DNA 链的凝结,并突出了它们的特异性。研究讨论了离子环境对染色质特性的影响,强调了一价和二价阳离子在中和 DNA 电荷和促进压实方面的作用。三价离子诱导显著的压实作用,而二价离子也有作用,但不那么强烈。高浓度的多价反离子会促进电荷反转,从而影响 DNA 的凝聚动力学。调节溶液的 pH 值和介电常数可双向改变电荷反转。有机阳离子驱动的疏水效应在 DNA 凝聚过程中起着至关重要的作用。综述强调了电荷反转的影响,包括阳离子胶束与 DNA 结合所产生的宏观相分离和 DNA 沉淀。
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来源期刊
Progress in Biophysics & Molecular Biology
Progress in Biophysics & Molecular Biology 生物-生化与分子生物学
CiteScore
8.60
自引率
7.90%
发文量
85
审稿时长
85 days
期刊介绍: Progress in Biophysics & Molecular Biology is an international review journal and covers the ground between the physical and biological sciences since its launch in 1950. It indicates to the physicist the great variety of unsolved problems awaiting attention in biology and medicine. The biologist and biochemist will find that this journal presents new and stimulating ideas and novel approaches to studying and influencing structural and functional properties of the living organism. This journal will be of particular interest to biophysicists, biologists, biochemists, cell physiologists, systems biologists, and molecular biologists.
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