Site-Specific Clustering of Bioactive Signaling Molecules Predicted In Situ by Space and Time Coherent Mapping for Imaging Mass Spectrometry.

IF 3.1 2区 化学 Q2 BIOCHEMICAL RESEARCH METHODS Journal of the American Society for Mass Spectrometry Pub Date : 2024-11-24 DOI:10.1021/jasms.4c00333
Jun Aoki, Masako Isokawa, Masahiro Ueda
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Abstract

Anatomical representation of site-specific clustering of biomolecules is a powerful way of predicting a potential interaction among signaling cascades and orchestrating molecular functions in cells and organs. The greater the number of molecules visualized simultaneously, the deeper we can understand each molecule's role in cellular metabolism and function. In the present study, we investigated site-specific localization of small biomolecules in the slug using Space and Time Coherent Mapping (STCM), a key technology in matrix-assisted laser desorption ionization time-of-flight imaging mass spectrometry. We acquired mass measurements and mass-based molecular images simultaneously under the microscope-mode instrumentation developed specifically in our laboratory. Mass images were generated in the increment of 0.2 in the mass-to-charge ratio (m/z) with spatial resolution of 2 μm. Resultant images were unique in each mass increment and allowed us to predict anatomical site-specific clustering of bioactive signaling molecules. We suggest that STCM is a useful tool to promote the compilation of comprehensive molecular maps and understand the role of individual molecules and their interactive mechanisms in situ.

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通过成像质谱的时空相干图法预测生物活性信号分子的特定位点原位聚类。
对生物大分子的特定位点聚类进行解剖表示,是预测信号级联之间潜在相互作用以及协调细胞和器官中分子功能的有力方法。同时可视化的分子数量越多,我们就能越深入地了解每个分子在细胞代谢和功能中的作用。在本研究中,我们利用基质辅助激光解吸电离飞行时间成像质谱的一项关键技术--时空相干绘图(STCM),研究了蛞蝓体内小生物分子的特定位点定位。我们在实验室专门开发的显微镜模式仪器下同时获得了质量测量结果和基于质量的分子图像。质量图像的质量电荷比(m/z)增量为 0.2,空间分辨率为 2 μm。结果图像在每个质量增量中都是唯一的,使我们能够预测生物活性信号分子在特定部位的聚集情况。我们认为,STCM 是一种有用的工具,可促进全面分子图谱的编制,并了解单个分子的作用及其在原位的相互作用机制。
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来源期刊
CiteScore
5.50
自引率
9.40%
发文量
257
审稿时长
1 months
期刊介绍: The Journal of the American Society for Mass Spectrometry presents research papers covering all aspects of mass spectrometry, incorporating coverage of fields of scientific inquiry in which mass spectrometry can play a role. Comprehensive in scope, the journal publishes papers on both fundamentals and applications of mass spectrometry. Fundamental subjects include instrumentation principles, design, and demonstration, structures and chemical properties of gas-phase ions, studies of thermodynamic properties, ion spectroscopy, chemical kinetics, mechanisms of ionization, theories of ion fragmentation, cluster ions, and potential energy surfaces. In addition to full papers, the journal offers Communications, Application Notes, and Accounts and Perspectives
期刊最新文献
Imaging Mass Spectrometry of Sulfatide Isomers from Rat Brain Tissue Using Gas-Phase Charge Inversion Ion/Ion Reactions. Studying Structural Details in Complex Samples: II. High Field Asymmetric Waveform Ion Mobility Spectrometry (FAIMS) Coupled to High Resolution Tandem Mass Spectrometry (MS/MS). Site-Specific Clustering of Bioactive Signaling Molecules Predicted In Situ by Space and Time Coherent Mapping for Imaging Mass Spectrometry. Molecular Oxygen (O2) Artifacts in Tandem Mass Spectra. Subcellular Proteomic Mapping of Lysine Lactylation.
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