Canonical Amplifications and CDKN2A/B Loss Refine IDH1/2-mutant Astrocytoma Prognosis.

IF 16.4 1区 医学 Q1 CLINICAL NEUROLOGY Neuro-oncology Pub Date : 2024-11-25 DOI:10.1093/neuonc/noae258
Hia S Ghosh, Ruchit V Patel, Elizabeth B Claus, L Nicolas Gonzalez Castro, Patrick Y Wen, Keith L Ligon, David M Meredith, Wenya Linda Bi
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Abstract

Background: Molecular features have been incorporated alongside histologic criteria to improve glioma diagnostics and prognostication. CDKN2A/B homozygous-loss associates with worse survival in IDH1/2-mutant astrocytomas (IDHmut-astrocytomas), the presence of which denotes grade 4 tumor independent of histologic features. However, no molecular features distinguish survival amongst histologically-defined grade 2 and 3 IDHmut-astrocytomas.

Methods: We assembled a cohort of patients ≥19 years old diagnosed with an IDHmut-astrocytoma between 1989-2020 from public datasets and several academic medical centers. Multivariate modeling and unbiased clustering were used to stratify risk.

Results: We identified 998 IDHmut-astrocytoma patients (41.5% female; 85.6% white). Tumor grade, CDKN2A/B loss, and/or ≥1 focal amplification was associated with reduced survival. Grade 2/3 patients with intact CDKN2A/B and no focal amplifications survived the longest (OS 205.7 months). Survival for grade 2/3 cases with either CDKN2A/B hemizygous-loss or focal amplifications (80.4, 88.7 months respectively) did not differ significantly from grade 4 cases with intact CDKN2A/B and no amplifications (91.5 months, p=0.93). Grade 4 patients with either hemizygous or homozygous loss of CDKN2A/B had the shortest survival (OS 31.9, 32.5 months respectively), followed by grade 4 cases with intact CDKN2A/B and focal gene amplifications (OS 55.9 months). Integrating CDKN2A/B status and amplifications alongside histopathologic grade refined overall survival prediction. Unbiased clustering revealed 9 distinct molecular profiles, with differential survival. IDHmut-astrocytomas with any CDKN2A/B-loss clustered together, regardless of grade, and exhibited the poorest outcomes.

Conclusions: Combining CDKN2A/B hemizygous-loss and focal gene amplifications reveals a group of IDHmut-astrocytoma patients with intermediate prognosis, refining IDHmut-astrocytoma classification.

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典型扩增和 CDKN2A/B 缺失细化了 IDH1/2 突变星形细胞瘤的预后。
背景:分子特征已被纳入组织学标准,以改善胶质瘤的诊断和预后。CDKN2A/B同基因缺失与IDH1/2突变星形细胞瘤(IDHmut-astrocytomas)的生存率降低有关,CDKN2A/B同基因缺失表示肿瘤为4级,与组织学特征无关。然而,在组织学定义的2级和3级IDHmut-星形细胞瘤中,没有任何分子特征能区分生存率:我们从公共数据集和几个学术医疗中心收集了1989-2020年间被诊断为IDHmut-胃细胞瘤的≥19岁的患者队列。采用多变量建模和无偏聚类对风险进行分层:我们发现了998名IDHmut-胃细胞瘤患者(41.5%为女性;85.6%为白人)。肿瘤分级、CDKN2A/B缺失和/或≥1个病灶扩增与生存率降低有关。CDKN2A/B完整且无局灶性扩增的2/3级患者存活时间最长(OS 205.7个月)。CDKN2A/B半卵球形缺失或局灶性扩增的2/3级病例的生存期(分别为80.4个月和88.7个月)与CDKN2A/B完整且无扩增的4级病例(91.5个月,P=0.93)无显著差异。CDKN2A/B半杂合子或同卵合子缺失的4级患者生存期最短(OS分别为31.9个月和32.5个月),其次是CDKN2A/B完整且存在局灶性基因扩增的4级病例(OS为55.9个月)。将CDKN2A/B状态和基因扩增与组织病理学分级结合起来,可完善总生存期预测。无偏聚类显示了9种不同的分子特征,其生存期也有所不同。具有任何CDKN2A/B缺失的IDHmut-胃细胞瘤聚集在一起,无论其分级如何,均表现出最差的预后:结论:结合CDKN2A/B半基因缺失和局灶基因扩增,可发现一组预后居中的IDHmut-胃细胞瘤患者,从而完善了IDHmut-胃细胞瘤的分类。
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来源期刊
Neuro-oncology
Neuro-oncology 医学-临床神经学
CiteScore
27.20
自引率
6.30%
发文量
1434
审稿时长
3-8 weeks
期刊介绍: Neuro-Oncology, the official journal of the Society for Neuro-Oncology, has been published monthly since January 2010. Affiliated with the Japan Society for Neuro-Oncology and the European Association of Neuro-Oncology, it is a global leader in the field. The journal is committed to swiftly disseminating high-quality information across all areas of neuro-oncology. It features peer-reviewed articles, reviews, symposia on various topics, abstracts from annual meetings, and updates from neuro-oncology societies worldwide.
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