{"title":"Automatic segmentation of prostate and organs at risk in CT images using an encoder–decoder structure based on residual neural network","authors":"Silvia M. Gutiérrez-Ramos , Miguel Altuve","doi":"10.1016/j.bspc.2024.107234","DOIUrl":null,"url":null,"abstract":"<div><div>Accurate segmentation of the prostate and surrounding organs at risk (OARs) from CT scans is critical for radiotherapy treatment planning in prostate cancer. However, manual segmentation is time-consuming and prone to variability. This paper proposes a deep learning-based approach using a pre-trained ResNet-18 combined with an encoder–decoder structure based on DeepLabv3+. The method automates the segmentation of the prostate, bladder, and rectum in male pelvic CT scans, achieving precise and efficient results without requiring preprocessing or extensive manual refinement. Evaluated on 100 CT scans using 10-fold cross-validation, the model demonstrates strong performance (Dice Similarity Coefficient (DSC) and Hausdorff Distance (HD)) on prostate (DSC: <span><math><mrow><mn>84</mn><mo>.</mo><mn>32</mn><mo>±</mo><mn>4</mn><mo>.</mo><mn>88</mn><mtext>%</mtext></mrow></math></span>, HD: <span><math><mrow><mn>3</mn><mo>.</mo><mn>95</mn><mo>±</mo><mn>0</mn><mo>.</mo><mn>60</mn><mspace></mspace><mi>mm</mi></mrow></math></span>), bladder (DSC: <span><math><mrow><mn>86</mn><mo>.</mo><mn>53</mn><mo>±</mo><mn>3</mn><mo>.</mo><mn>66</mn><mtext>%</mtext></mrow></math></span>, HD: <span><math><mrow><mn>4</mn><mo>.</mo><mn>58</mn><mo>±</mo><mn>0</mn><mo>.</mo><mn>72</mn><mspace></mspace><mi>mm</mi></mrow></math></span>), and rectum (DSC: <span><math><mrow><mn>83</mn><mo>.</mo><mn>92</mn><mo>±</mo><mn>4</mn><mo>.</mo><mn>18</mn><mtext>%</mtext></mrow></math></span>, HD: <span><math><mrow><mn>2</mn><mo>.</mo><mn>99</mn><mo>±</mo><mn>0</mn><mo>.</mo><mn>40</mn><mspace></mspace><mi>mm</mi></mrow></math></span>) segmentation. Additionally, a user-friendly MATLAB application is developed to automate the segmentation process. This approach has the potential to improve treatment planning efficiency, accuracy, and consistency for better patient outcomes.</div></div>","PeriodicalId":55362,"journal":{"name":"Biomedical Signal Processing and Control","volume":"101 ","pages":"Article 107234"},"PeriodicalIF":4.9000,"publicationDate":"2024-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical Signal Processing and Control","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1746809424012928","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Accurate segmentation of the prostate and surrounding organs at risk (OARs) from CT scans is critical for radiotherapy treatment planning in prostate cancer. However, manual segmentation is time-consuming and prone to variability. This paper proposes a deep learning-based approach using a pre-trained ResNet-18 combined with an encoder–decoder structure based on DeepLabv3+. The method automates the segmentation of the prostate, bladder, and rectum in male pelvic CT scans, achieving precise and efficient results without requiring preprocessing or extensive manual refinement. Evaluated on 100 CT scans using 10-fold cross-validation, the model demonstrates strong performance (Dice Similarity Coefficient (DSC) and Hausdorff Distance (HD)) on prostate (DSC: , HD: ), bladder (DSC: , HD: ), and rectum (DSC: , HD: ) segmentation. Additionally, a user-friendly MATLAB application is developed to automate the segmentation process. This approach has the potential to improve treatment planning efficiency, accuracy, and consistency for better patient outcomes.
期刊介绍:
Biomedical Signal Processing and Control aims to provide a cross-disciplinary international forum for the interchange of information on research in the measurement and analysis of signals and images in clinical medicine and the biological sciences. Emphasis is placed on contributions dealing with the practical, applications-led research on the use of methods and devices in clinical diagnosis, patient monitoring and management.
Biomedical Signal Processing and Control reflects the main areas in which these methods are being used and developed at the interface of both engineering and clinical science. The scope of the journal is defined to include relevant review papers, technical notes, short communications and letters. Tutorial papers and special issues will also be published.