C11orf58 (Hero20) Gene Polymorphism: Contribution to Ischemic Stroke Risk and Interactions with Other Heat-Resistant Obscure Chaperones.

IF 3.9 3区 工程技术 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biomedicines Pub Date : 2024-11-14 DOI:10.3390/biomedicines12112603
Irina Shilenok, Ksenia Kobzeva, Vladislav Soldatov, Alexey Deykin, Olga Bushueva
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引用次数: 0

Abstract

Background: Recently identified Hero proteins, which possess chaperone-like functions, are promising candidates for research into atherosclerosis-related diseases, including ischemic stroke (IS). Methods: 2204 Russian subjects (917 IS patients and 1287 controls) were genotyped for fifteen common SNPs in Hero20 gene C11orf58 using probe-based PCR and the MassArray-4 system. Results: Six C11orf58 SNPs were significantly associated with an increased risk of IS in the overall group (OG) and significantly modified by smoking (SMK) and low fruit/vegetable intake (LFVI): rs10766342 (effect allele (EA) A; P(OG = 0.02; SMK = 0.009; LFVI = 0.04)), rs11024032 (EA T; P(OG = 0.01; SMK = 0.01; LFVI = 0.036)), rs11826990 (EA G; P(OG = 0.007; SMK = 0.004; LFVI = 0.03)), rs3203295 (EA C; P(OG = 0.016; SMK = 0.01; LFVI = 0.04)), rs10832676 (EA G; P(OG = 0.006; SMK = 0.002; LFVI = 0.01)), rs4757429 (EA T; P(OG = 0.02; SMK = 0.04; LFVI = 0.04)). The top ten intergenic interactions of Hero genes (two-, three-, and four-locus models) involved exclusively polymorphic loci of C11orf58 and C19orf53 and were characterized by synergic and additive (independent) effects between SNPs. Conclusions: Thus, C11orf58 gene polymorphism represents a major risk factor for IS. Bioinformatic analysis showed the involvement of C11orf58 SNPs in molecular mechanisms of IS mediated by their role in the regulation of redox homeostasis, inflammation, vascular remodeling, apoptosis, vasculogenesis, neurogenesis, lipid metabolism, proteostasis, hypoxia, cell signaling, and stress response. In terms of intergenic interactions, C11orf58 interacts most closely with C19orf53.

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C11orf58 (Hero20) 基因多态性:对缺血性中风风险的贡献以及与其他耐热隐性伴侣的相互作用。
背景:最近发现的英雄蛋白具有类似伴侣的功能,是研究动脉粥样硬化相关疾病(包括缺血性中风(IS))的有希望的候选蛋白。方法:使用探针式 PCR 和 MassArray-4 系统对 2204 名俄罗斯受试者(917 名 IS 患者和 1287 名对照者)进行了 Hero20 基因 C11orf58 中 15 个常见 SNP 的基因分型。结果显示在总体组(OG)中,6 个 C11orf58 SNP 与 IS 风险增加显著相关,并因吸烟(SMK)和水果/蔬菜摄入量低(LFVI)而显著改变:rs10766342(效应等位基因(EA)A;P(OG = 0.02;SMK = 0.009;LFVI = 0.04))、rs11024032(EA T;P(OG = 0.01;SMK = 0.01;LFVI = 0.036)),rs11826990(EA G;P(OG = 0.007;SMK = 0.004;LFVI = 0.03)),rs3203295(EA C;P(OG = 0.016;SMK = 0.01;LFVI = 0.04))、rs10832676(EA G;P(OG = 0.006;SMK = 0.002;LFVI = 0.01))、rs4757429(EA T;P(OG = 0.02;SMK = 0.04;LFVI = 0.04))。英雄基因的前十个基因间相互作用(双焦点、三焦点和四焦点模型)只涉及 C11orf58 和 C19orf53 的多态性位点,其特点是 SNP 之间的协同效应和相加效应(独立)。结论因此,C11orf58 基因多态性是 IS 的主要风险因素。生物信息学分析表明,C11orf58 SNPs参与了IS的分子机制,它们在氧化还原稳态、炎症、血管重塑、细胞凋亡、血管生成、神经发生、脂质代谢、蛋白稳态、缺氧、细胞信号传导和应激反应的调控中发挥作用。在基因间相互作用方面,C11orf58 与 C19orf53 的相互作用最为密切。
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来源期刊
Biomedicines
Biomedicines Biochemistry, Genetics and Molecular Biology-General Biochemistry,Genetics and Molecular Biology
CiteScore
5.20
自引率
8.50%
发文量
2823
审稿时长
8 weeks
期刊介绍: Biomedicines (ISSN 2227-9059; CODEN: BIOMID) is an international, scientific, open access journal on biomedicines published quarterly online by MDPI.
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