Predicting Survival and Recurrence of Lung Ablation Patients Using Deep Learning-Based Automatic Segmentation and Radiomics Analysis.

IF 2.8 3区 医学 Q2 CARDIAC & CARDIOVASCULAR SYSTEMS CardioVascular and Interventional Radiology Pub Date : 2024-11-27 DOI:10.1007/s00270-024-03912-9
Hossam A Zaki, Karim Oueidat, Celina Hsieh, Helen Zhang, Scott Collins, Zhicheng Jiao, Aaron W P Maxwell
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Abstract

Purpose: To predict survival and tumor recurrence following image-guided thermal ablation (IGTA) of lung tumors segmented using a deep learning approach.

Methods and materials: A total of 113 patients who underwent IGTA for primary and metastatic lung tumors at a single institution between January 1, 2004 and July 14, 2022 were retrospectively identified. A pretrained U-Net model was applied to the dataset of pre- and post-procedure CT scans to segment lung zones. Following lung segmentation, a U-shaped encoder-decoder transformer architecture (UNETR) was trained to segment lung tumors from pre- and post-procedure CT scans, and radiomic features were automatically extracted. These features were input into a support vector machine (SVM)-based survival prediction model trained to assign rank scores to samples based on binary survival or recurrence label and follow-up time. C-index and time-dependent AUC were subsequently calculated to evaluate model performance.

Results: Initial tumor segmentation using UNETR achieved a Dice score of 0.75. Applying a radiomics-based survivability prediction model to the post-procedure scans resulted in a c-index of 0.71 and a time-dependent AUC of 0.75. In contrast, when this model was applied to pre-procedure scans, it achieved a 0.56 for both metrics. For predicting time to recurrence, the radiomics-based model achieved a c-index of 0.65 and a time-dependent AUC of 0.72 on post-procedure imaging. In contrast, when this model was applied to pre-procedure scans, it achieved a 0.54 for both metrics.

Conclusion: Radiomic feature analysis of lung tumors following automatic segmentation by a state-of-the-art transformer-based U-NET may predict survival and recurrence following image-guided thermal ablation of pulmonary malignancies.

Level of evidence: Level 3, Retrospective cohort study.

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利用基于深度学习的自动分割和放射组学分析预测肺消融患者的存活率和复发率
目的:预测使用深度学习方法分割的肺肿瘤图像引导热消融(IGTA)后的生存率和肿瘤复发率:回顾性识别了2004年1月1日至2022年7月14日期间在一家机构接受IGTA治疗的113名原发性和转移性肺肿瘤患者。将预先训练好的 U-Net 模型应用于术前和术后 CT 扫描数据集,以分割肺区。肺部分割后,对 U 型编码器-解码器变换器架构(UNETR)进行训练,以分割手术前后 CT 扫描中的肺部肿瘤,并自动提取放射学特征。这些特征被输入到基于支持向量机(SVM)的生存预测模型中,该模型经过训练,可根据二元生存或复发标签和随访时间为样本分配等级分数。随后计算 C 指数和随时间变化的 AUC,以评估模型的性能:结果:使用 UNETR 进行的初始肿瘤分割的 Dice 得分为 0.75。将基于放射组学的存活率预测模型应用于术后扫描,C指数为0.71,随时间变化的AUC为0.75。相比之下,当该模型应用于术前扫描时,两个指标均为 0.56。在预测复发时间方面,基于放射组学的模型在手术后成像中的 c 指数为 0.65,随时间变化的 AUC 为 0.72。相比之下,当这一模型应用于手术前扫描时,两个指标均为0.54:结论:通过最先进的基于变压器的 U-NET 进行自动分割后,对肺部肿瘤进行放射学特征分析,可预测肺部恶性肿瘤图像引导热消融术后的生存率和复发率:3级,回顾性队列研究。
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来源期刊
CiteScore
5.50
自引率
13.80%
发文量
306
审稿时长
3-8 weeks
期刊介绍: CardioVascular and Interventional Radiology (CVIR) is the official journal of the Cardiovascular and Interventional Radiological Society of Europe, and is also the official organ of a number of additional distinguished national and international interventional radiological societies. CVIR publishes double blinded peer-reviewed original research work including clinical and laboratory investigations, technical notes, case reports, works in progress, and letters to the editor, as well as review articles, pictorial essays, editorials, and special invited submissions in the field of vascular and interventional radiology. Beside the communication of the latest research results in this field, it is also the aim of CVIR to support continuous medical education. Articles that are accepted for publication are done so with the understanding that they, or their substantive contents, have not been and will not be submitted to any other publication.
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