Weakly nonlinear analysis of minimal models for Turing patterns

IF 2.7 3区 数学 Q1 MATHEMATICS, APPLIED Physica D: Nonlinear Phenomena Pub Date : 2024-11-19 DOI:10.1016/j.physd.2024.134427
F.R. Waters , C.A. Yates , J.H.P. Dawes
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Abstract

The simplest particle-based mass-action models for Turing instability – i.e. those with only two component species undergoing instantaneous interactions of at most two particles, with the smallest number of distinct interactions – fall into a surprisingly small number of classes of reaction schemes. In previous work we have computed this classification, with different schemes distinguished by the structure of the interactions. Within a given class the reaction stoichiometry and rates remain as parameters that determine the linear and nonlinear evolution of the system.
Adopting the usual weakly nonlinear scalings and analysis reveals that, under suitable choices of reaction stoichiometry, and in nine of the 11 classes of minimal scheme exhibiting a spatially in-phase (“true activator-inhibitor”) Turing instability, stable patterns are indeed generated in open regions of parameter space via a generically supercritical bifurcation from the spatially uniform state. In three of these classes the instability is always supercritical while in six there is an open region in which it is subcritical. Intriguingly, however, in the remaining two classes of minimal scheme we require different weakly nonlinear scalings, since the coefficient in the usual cubic normal form unexpectedly vanishes identically. In these cases, a different set of asymptotic scalings is required.
We present a complete analysis through deriving the normal form for these two cases also, which involves quintic terms. This fifth-order normal form also captures the behaviour along the boundaries between the supercritical and subcritical cases of the cubic normal form. The details of these calculations reveal the distinct roles played by reaction rate parameters as compared to stoichiometric parameters.
We quantitatively validate our analysis via numerical simulations and confirm the two different scalings for the amplitude of predicted stable patterned states.
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图灵模式最小模型的弱非线性分析
图灵不稳定性的最简单的基于粒子的质量作用模型——即那些只有两个组分的模型,它们经历最多两个粒子的瞬时相互作用,具有最小数量的不同的相互作用——属于数量少得惊人的反应方案。在以前的工作中,我们已经计算了这种分类,用不同的方案来区分相互作用的结构。在给定的类中,反应的化学计量和速率仍然是决定系统线性和非线性演化的参数。采用通常的弱非线性标度和分析表明,在适当的反应化学配比选择下,在表现出空间同相(“真正的活化剂-抑制剂”)图灵不稳定性的11类最小方案中的9类中,通过从空间均匀状态的一般超临界分岔,在参数空间的开放区域中确实产生了稳定模式。在其中的三个类别中,不稳定性总是超临界的,而在六个类别中,有一个开放区域,它是亚临界的。然而,有趣的是,在剩下的两类最小格式中,我们需要不同的弱非线性标度,因为通常的三次范式中的系数出人意料地完全消失。在这些情况下,需要一组不同的渐近标量。我们也通过推导这两种情况的范式给出了完整的分析,其中涉及五次项。这种五阶范式也捕获了沿三次范式的超临界和亚临界情况之间边界的行为。这些计算的细节揭示了与化学计量参数相比,反应速率参数所起的独特作用。我们通过数值模拟定量验证了我们的分析,并确认了预测稳定模式状态振幅的两种不同比例。
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来源期刊
Physica D: Nonlinear Phenomena
Physica D: Nonlinear Phenomena 物理-物理:数学物理
CiteScore
7.30
自引率
7.50%
发文量
213
审稿时长
65 days
期刊介绍: Physica D (Nonlinear Phenomena) publishes research and review articles reporting on experimental and theoretical works, techniques and ideas that advance the understanding of nonlinear phenomena. Topics encompass wave motion in physical, chemical and biological systems; physical or biological phenomena governed by nonlinear field equations, including hydrodynamics and turbulence; pattern formation and cooperative phenomena; instability, bifurcations, chaos, and space-time disorder; integrable/Hamiltonian systems; asymptotic analysis and, more generally, mathematical methods for nonlinear systems.
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