MRI-based radiomics virtual biopsy for BCL6 in primary central nervous system lymphoma

IF 2.1 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Clinical radiology Pub Date : 2024-11-08 DOI:10.1016/j.crad.2024.106746
J. Liu , J. Tu , L. Yao , L. Peng , R. Fang , Y. Lu , F. He , J. Xiong , Y. Li
{"title":"MRI-based radiomics virtual biopsy for BCL6 in primary central nervous system lymphoma","authors":"J. Liu ,&nbsp;J. Tu ,&nbsp;L. Yao ,&nbsp;L. Peng ,&nbsp;R. Fang ,&nbsp;Y. Lu ,&nbsp;F. He ,&nbsp;J. Xiong ,&nbsp;Y. Li","doi":"10.1016/j.crad.2024.106746","DOIUrl":null,"url":null,"abstract":"<div><h3>Aim</h3><div>To establish a machine learning model based on a radiomic signature for predicting B-cell lymphoma 6 (BCL-6) rearrangement in primary central nervous system lymphoma (PCNSL).</div></div><div><h3>Materials and Methods</h3><div>Retrospective study on 102 PCNSL patients (31 with BCL-6 rearrangement positive, 71 with BCL-6 rearrangement negative) were randomly divided into the training and validation sets at a ratio of 7:3. Radiomics models based on contrast-enhanced T1-weighted imaging (CE-T1WI) and fluid-attenuated inversion recovery (FLAIR) in different regions, including VOI<sub>tumour core</sub> and VOI<sub>peritumoural oedema.</sub> Radiomics features were extracted and selected using LASSO regression, and radiomics score (rad-score) were calculated using the weighted coefficients. Four machine learning models (logistic regression, random forest, support vector machine, K-nearest neighbours) were developed and evaluated based on rad-score. The optimal radiomics model was integrated into the clinical or radiological factors to construct a predictive model through logistic regression analysis. A nomogram was constructed based on independent significant features for individualised prediction.</div></div><div><h3>Results</h3><div>All rad-scores based on CE-T1WI and FLAIR sequences were significantly associated with BCL6 rearrangement (<em>p</em> &lt; 0.05) in univariate regression analysis. The logistic regression machine learning model performed best with AUCs of 0.935 (training) and 0.923 (validation). Rad-scores from CE-T1WI tumour core and peritumoural oedema were independent significant predictors.</div></div><div><h3>Conclusion</h3><div>Radiomics signatures based on CE-T1WI and FLAIR sequences have significant value in distinguishing BCL6 rearrangement. The CE-T1WI radiomics model based on VOI<sub>tumour core</sub> and VOI<sub>peritumoural oedema</sub> are robust markers for identifying BCL6 rearrangement.</div></div>","PeriodicalId":10695,"journal":{"name":"Clinical radiology","volume":"80 ","pages":"Article 106746"},"PeriodicalIF":2.1000,"publicationDate":"2024-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Clinical radiology","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S000992602400624X","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING","Score":null,"Total":0}
引用次数: 0

Abstract

Aim

To establish a machine learning model based on a radiomic signature for predicting B-cell lymphoma 6 (BCL-6) rearrangement in primary central nervous system lymphoma (PCNSL).

Materials and Methods

Retrospective study on 102 PCNSL patients (31 with BCL-6 rearrangement positive, 71 with BCL-6 rearrangement negative) were randomly divided into the training and validation sets at a ratio of 7:3. Radiomics models based on contrast-enhanced T1-weighted imaging (CE-T1WI) and fluid-attenuated inversion recovery (FLAIR) in different regions, including VOItumour core and VOIperitumoural oedema. Radiomics features were extracted and selected using LASSO regression, and radiomics score (rad-score) were calculated using the weighted coefficients. Four machine learning models (logistic regression, random forest, support vector machine, K-nearest neighbours) were developed and evaluated based on rad-score. The optimal radiomics model was integrated into the clinical or radiological factors to construct a predictive model through logistic regression analysis. A nomogram was constructed based on independent significant features for individualised prediction.

Results

All rad-scores based on CE-T1WI and FLAIR sequences were significantly associated with BCL6 rearrangement (p < 0.05) in univariate regression analysis. The logistic regression machine learning model performed best with AUCs of 0.935 (training) and 0.923 (validation). Rad-scores from CE-T1WI tumour core and peritumoural oedema were independent significant predictors.

Conclusion

Radiomics signatures based on CE-T1WI and FLAIR sequences have significant value in distinguishing BCL6 rearrangement. The CE-T1WI radiomics model based on VOItumour core and VOIperitumoural oedema are robust markers for identifying BCL6 rearrangement.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
原发性中枢神经系统淋巴瘤BCL6的mri放射组学虚拟活检
目的建立基于放射学特征预测原发性中枢神经系统淋巴瘤(PCNSL) b细胞淋巴瘤6 (BCL-6)重排的机器学习模型。材料与方法回顾性研究102例PCNSL患者(BCL-6重排阳性31例,BCL-6重排阴性71例),按7:3的比例随机分为训练组和验证组。基于对比增强t1加权成像(CE-T1WI)和液体衰减反转恢复(FLAIR)的不同区域放射组学模型,包括voi肿瘤核心和voi肿瘤周围水肿。利用LASSO回归提取并选择放射组学特征,利用加权系数计算放射组学评分(rad-score)。开发了四种机器学习模型(逻辑回归、随机森林、支持向量机、k近邻),并基于rad-score进行了评估。将最佳放射组学模型与临床或放射学因素结合,通过logistic回归分析构建预测模型。基于独立显著特征构建了一种模态图,用于个性化预测。结果所有基于CE-T1WI和FLAIR序列的评分均与BCL6重排显著相关(p <;0.05)。逻辑回归机器学习模型的auc为0.935(训练)和0.923(验证)。CE-T1WI肿瘤核心和肿瘤周围水肿的rad评分是独立的显著预测因子。结论基于CE-T1WI和FLAIR序列的放射组学特征对鉴别BCL6重排具有重要价值。基于voi肿瘤核心和voi肿瘤周围水肿的CE-T1WI放射组学模型是识别BCL6重排的可靠标记。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Clinical radiology
Clinical radiology 医学-核医学
CiteScore
4.70
自引率
3.80%
发文量
528
审稿时长
76 days
期刊介绍: Clinical Radiology is published by Elsevier on behalf of The Royal College of Radiologists. Clinical Radiology is an International Journal bringing you original research, editorials and review articles on all aspects of diagnostic imaging, including: • Computed tomography • Magnetic resonance imaging • Ultrasonography • Digital radiology • Interventional radiology • Radiography • Nuclear medicine Papers on radiological protection, quality assurance, audit in radiology and matters relating to radiological training and education are also included. In addition, each issue contains correspondence, book reviews and notices of forthcoming events.
期刊最新文献
Does training less-than-full-time predict performance at the FRCR exams?: a UKMED cohort study Interventional radiology is growing and is a pillar of modern cost-effective healthcare across the world Classifying, recognizing, and troubleshooting errors in magnetic resonance imaging (MRI)-guided breast biopsies Comparative study of 3D-T2WI vs. 3D-T2-FLAIR MRI in displaying human meningeal lymphatics vessels Dual-energy subtraction radiography (DESR): a systematic review and meta-analysis of pulmonary nodule detection
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1