Self-organizing network representation of human heart.

IF 2.7 2区 数学 Q1 MATHEMATICS, APPLIED Chaos Pub Date : 2024-12-01 DOI:10.1063/5.0243391
Runsang Liu, Hui Yang
{"title":"Self-organizing network representation of human heart.","authors":"Runsang Liu, Hui Yang","doi":"10.1063/5.0243391","DOIUrl":null,"url":null,"abstract":"<p><p>Network represents adjacent relationships, connections, and interactions among constituent elements in complex systems but often loses critical information about spatial configurations. However, structure-function relationships in biological systems, e.g., the human heart, are highly dependent on both connectivity relationships and geometric details. Therefore, this paper presents a new self-organizing approach to derive the geometric structure from a network representation of the heart. We propose to simulate the network as a physical system, where nodes are treated as charged particles and edges as springs and then let these nodes self-organize to reconstruct geometric details. Despite random initiations, this network evolves into a steady topology when its energy is minimized. This study addresses the open question, i.e., \"whether a network representation can effectively resemble spatial geometry of a biological system,\" thereby paving a stepstone to leverage network theory to investigate disease-altered biological functions.</p>","PeriodicalId":9974,"journal":{"name":"Chaos","volume":"34 12","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11614475/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chaos","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1063/5.0243391","RegionNum":2,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MATHEMATICS, APPLIED","Score":null,"Total":0}
引用次数: 0

Abstract

Network represents adjacent relationships, connections, and interactions among constituent elements in complex systems but often loses critical information about spatial configurations. However, structure-function relationships in biological systems, e.g., the human heart, are highly dependent on both connectivity relationships and geometric details. Therefore, this paper presents a new self-organizing approach to derive the geometric structure from a network representation of the heart. We propose to simulate the network as a physical system, where nodes are treated as charged particles and edges as springs and then let these nodes self-organize to reconstruct geometric details. Despite random initiations, this network evolves into a steady topology when its energy is minimized. This study addresses the open question, i.e., "whether a network representation can effectively resemble spatial geometry of a biological system," thereby paving a stepstone to leverage network theory to investigate disease-altered biological functions.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
人类心脏的自组织网络表示。
网络代表了复杂系统中组成元素之间的相邻关系、联系和相互作用,但往往会丢失有关空间结构的关键信息。然而,生物系统中的结构-功能关系,例如人类心脏,高度依赖于连接关系和几何细节。因此,本文提出了一种新的自组织方法,从心脏的网络表示中导出几何结构。我们建议将网络模拟为一个物理系统,其中节点被视为带电粒子,边缘被视为弹簧,然后让这些节点自组织来重建几何细节。尽管初始是随机的,但当能量最小时,该网络演化为稳定的拓扑结构。这项研究解决了一个悬而未决的问题,即“网络表示是否可以有效地类似于生物系统的空间几何”,从而为利用网络理论来研究疾病改变的生物功能奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Chaos
Chaos 物理-物理:数学物理
CiteScore
5.20
自引率
13.80%
发文量
448
审稿时长
2.3 months
期刊介绍: Chaos: An Interdisciplinary Journal of Nonlinear Science is a peer-reviewed journal devoted to increasing the understanding of nonlinear phenomena and describing the manifestations in a manner comprehensible to researchers from a broad spectrum of disciplines.
期刊最新文献
Continuum limit of the adaptive Kuramoto model. Directed recurrence networks for the analysis of nonlinear and complex dynamical systems. Evolution modeling and control of networked dynamic games with event-triggering mechanism. Koopman learning with episodic memory. Symbolic dynamics of joint brain states during dyadic coordination.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1