Sanguibacter biliveldensis sp. nov., a Gram-positive mesophilic bacterium isolated from plant lesions.

IF 2 3区 生物学 Q4 MICROBIOLOGY International journal of systematic and evolutionary microbiology Pub Date : 2024-12-01 DOI:10.1099/ijsem.0.006560
Annika Kiel, Laureen Patricia Helweg, Bernhard Peter Kaltschmidt, Max Paul Wohllebe, Fabian Hitz, Andreas Hütten, Cornelius Knabbe, Karsten Niehaus, Dorothee Staiger, Christian Rückert-Reed, Tobias Busche, Barbara Kaltschmidt, Christian Kaltschmidt
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Abstract

A bacterial strain was isolated from pathogenic lesions of Acer campestre tree leaves from the Teutoburg Forest in North Rhine-Westphalia, Germany, by culture on non-selective agar plates. 16S rRNA sequencing revealed 100% similarity to Sanguibacter keddieii and Sanguibacter inulinus, as well as 99% similarity to Sanguibacter gelidistatuariae and Sanguibacter antarcticus. Here, we used genome-based taxonomy with the Type (Strain) Genome Server (TYGS), which suggests the isolation of a novel prokaryotic strain. According to TYGS-analysis, using whole genome digital DNA-DNA hybridization, only 65.5% similarity to the closest relative S. inulinus was revealed, suggesting a novel species. Growth was observed at both aerobic and anaerobic conditions. Bacterial cells depicted coryneform motile rods, with a length of 1.1-3.3 µm and a constant diameter of 0.5 µm. Cells did not form spores under the tested conditions and stain Gram-positive. Growth occurred between 0.5 and 4% NaCl (optimal: 1%), at pH 5.5-9.5 (optimal: 8.0-9.0). The strain was mesophilic with an optimal growth at 25°C. Major cellular fatty acids of the novel strain were anteiso-C15 : 0 and C16 : 0.

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一种从植物损伤处分离出来的革兰氏阳性嗜中温细菌。
在德国北莱茵-威斯特伐利亚州的条顿堡森林中,通过非选择性琼脂培养,从槭树叶的致病病变中分离出一株细菌。16S rRNA测序结果显示,该菌株与kedidieii血杆菌和inulinus血杆菌的相似性为100%,与gelidistatuariae血杆菌和antarcticus血杆菌的相似性为99%。在此,我们使用类型(菌株)基因组服务器(TYGS)进行基因组分类,这表明分离到了一种新的原核菌株。根据tygs分析,利用全基因组数字DNA-DNA杂交,发现其与近缘种菊属(S. inulinus)的相似性仅为65.5%,为新种。在好氧和厌氧条件下均观察到生长。细菌细胞呈棒状活动杆,长度为1.1-3.3µm,直径为0.5µm。在实验条件下,细胞不形成孢子,革兰氏阳性染色。生长在0.5 ~ 4% NaCl(最适为1%),pH为5.5 ~ 9.5(最适为8.0 ~ 9.0)。菌株为中温细菌,在25℃下生长最佳。新菌株的主要细胞脂肪酸为前iso- c15: 0和C16: 0。
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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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