Detection and molecular epidemiology of canine parvovirus and identification of highly pathogenic CPV-2c isolates from Shandong, China.

IF 1.9 4区 医学 Q3 GENETICS & HEREDITY Virus Genes Pub Date : 2025-02-01 Epub Date: 2024-12-03 DOI:10.1007/s11262-024-02125-z
Jiahui Li, Baoyu Cheng, Zihe Li, Yanlei Cui, Haiyan Yang, Weiquan Liu, Chuanmei Zhang, Yongle Yu
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Abstract

Canine parvovirus (CPV) is an important pathogen of dogs and wild carnivores. It is a single-stranded DNA virus with a high mutation frequency and antigenic drift. To research the prevalence and genetic variation of CPV in Shandong, 62 samples from diseased dogs were collected and examined by using PCR for parvovirus. Our results showed that the positivity was 62.9% (n = 39), VP2 gene were sequenced and compared with reference strains. For the parvovirus subtype prevalence, 7 strains were CPV-2a (17.9%) and 32 strains were CPV-2c (82.1%). The results of phylogenetic analysis of VP2 gene of the CPVs showed all 39 isolates formed a major clade and were distantly related to the commercial vaccine strains. By comparing amino acid (aa) sequences, this study discovered new mutations not previously reported which may be related to host range and antigenicity. Moreover, one CPV-2c strain (QN-55) was isolated and cultured on F81 cells, and characterized by whole-genome sequencing. The TCID50 of this strain was 10-3.2/0.1 mL and animal tests have shown that the strain is fatal to infected dogs.

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山东犬细小病毒检测、分子流行病学及高致病性CPV-2c分离株鉴定
犬细小病毒(Canine parvovirus, CPV)是犬类和野生食肉动物的重要病原体。它是一种单链DNA病毒,具有高突变频率和抗原漂移。为研究山东省CPV流行情况及遗传变异,收集62份病犬标本,采用聚合酶链反应(PCR)检测细小病毒。结果为62.9% (n = 39),对VP2基因进行了测序,并与参考菌株进行了比较。细小病毒亚型CPV-2a 7株(17.9%),CPV-2c 32株(82.1%)。对39株cpv的VP2基因进行系统发育分析,结果表明,这39株cpv的VP2基因形成了一个主进化支,与商品疫苗株有较远的亲缘关系。通过比较氨基酸(aa)序列,本研究发现了以前未报道的可能与宿主范围和抗原性有关的新突变。分离CPV-2c菌株QN-55,在F81细胞上培养,并进行全基因组测序鉴定。该菌株的TCID50为10-3.2/0.1 mL,动物试验表明该菌株对感染的犬具有致命性。
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来源期刊
Virus Genes
Virus Genes 医学-病毒学
CiteScore
3.30
自引率
0.00%
发文量
76
审稿时长
3 months
期刊介绍: Viruses are convenient models for the elucidation of life processes. The study of viruses is again on the cutting edge of biological sciences: systems biology, genomics, proteomics, metagenomics, using the newest most powerful tools. Huge amounts of new details on virus interactions with the cell, other pathogens and the hosts – animal (including human), insect, fungal, plant, bacterial, and archaeal - and their role in infection and disease are forthcoming in perplexing details requiring analysis and comments. Virus Genes is dedicated to the publication of studies on the structure and function of viruses and their genes, the molecular and systems interactions with the host and all applications derived thereof, providing a forum for the analysis of data and discussion of its implications, and the development of new hypotheses.
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