Identification of Novel Drug Molecules Against NS3-Like Helicase Enzyme of Alongshan Virus.

IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Biotechnology Pub Date : 2024-12-06 DOI:10.1007/s12033-024-01326-z
Fizza Gul, Sajjad Ahmad, Kalsoom Khan, Rehana Masood, Farhan Siddique, Mehvish Bibi, Salma Mohammed Aljahdali, Mohammad Abdullah Aljasir, Tabarak Sabah Jassim, Dong-Qing Wei, Muhammad Irfan
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Abstract

Alongshan virus (ALSV) is a novel tick-borne virus associated with human diseases. The ALSV is a segmented flavivirus from the family Flaviviridae. It is currently considered as tick-borne arbovirus. There is a high incidence of fever and headache among patients with ALSV infection, and some patients also present with fatigue, coma, depression, nausea, myalgia/arthralgia, and skin rashes. Neither a licensed vaccine nor a drug is currently available to treat ALSV. The development of new, practical, and innovative therapeutic approaches is needed to overcome the emergence of the pathogen. Research on drugs remains a complex, time-consuming, and expensive. The field of drug development has undergone a revolution due to the use of computational approaches, which provide several benefits that speed up and improve the process of developing novel drugs. The goal of this study is to identify novel drug-like molecules against NS3-like helicase enzyme of Alongshan virus. Using molecular docking, the binding potential of the top three ligands to the specified target was determined. Molecular dynamic simulations were used to identify the stabilities of the best-docked conformations followed by energy calculations and ADMET analysis. Three potential and promising compounds were identified by performing structure-based virtual screening of non-structural protein 3 (NS3) like helicase of Alongshan virus. The best-docked complexes identified through virtual screening were BDC-23169381, BDB-26412846, BDB-2641954. All these compounds had good pharmacokinetics characteristics and were identified as drug like.

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抗龙山病毒ns3样解旋酶新药物分子的鉴定。
阿隆山病毒(ALSV)是一种与人类疾病相关的新型蜱传病毒。ALSV是黄病毒科的一种分节型黄病毒。目前被认为是蜱传虫媒病毒。ALSV感染患者发热和头痛发生率高,部分患者还出现疲劳、昏迷、抑郁、恶心、肌痛/关节痛和皮疹。目前还没有获得许可的疫苗或药物可用于治疗ALSV。需要开发新的、实用的和创新的治疗方法来克服病原体的出现。药物研究仍然是一项复杂、耗时和昂贵的工作。由于计算方法的使用,药物开发领域经历了一场革命,计算方法提供了加速和改进新药开发过程的几个好处。本研究的目的是鉴定抗阿隆山病毒ns3样解旋酶的新型药物样分子。通过分子对接,确定了前三种配体与指定靶标的结合势。通过分子动力学模拟来确定最佳对接构象的稳定性,然后进行能量计算和ADMET分析。通过对龙山病毒非结构蛋白3 (NS3)样解旋酶的结构虚拟筛选,鉴定出3个有潜力的化合物。通过虚拟筛选得到的最佳对接配合物为BDC-23169381、BDB-26412846、BDB-2641954。这些化合物均具有良好的药动学特征,被鉴定为类药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Molecular Biotechnology
Molecular Biotechnology 医学-生化与分子生物学
CiteScore
4.10
自引率
3.80%
发文量
165
审稿时长
6 months
期刊介绍: Molecular Biotechnology publishes original research papers on the application of molecular biology to both basic and applied research in the field of biotechnology. Particular areas of interest include the following: stability and expression of cloned gene products, cell transformation, gene cloning systems and the production of recombinant proteins, protein purification and analysis, transgenic species, developmental biology, mutation analysis, the applications of DNA fingerprinting, RNA interference, and PCR technology, microarray technology, proteomics, mass spectrometry, bioinformatics, plant molecular biology, microbial genetics, gene probes and the diagnosis of disease, pharmaceutical and health care products, therapeutic agents, vaccines, gene targeting, gene therapy, stem cell technology and tissue engineering, antisense technology, protein engineering and enzyme technology, monoclonal antibodies, glycobiology and glycomics, and agricultural biotechnology.
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