Peeking into the future: inferring mechanics in dynamical tissues.

IF 3.8 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical Society transactions Pub Date : 2024-12-19 DOI:10.1042/BST20230225
Augusto Borges, Osvaldo Chara
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Abstract

Cells exert forces on each other and their environment, shaping the tissue. The resulting mechanical stresses can be determined experimentally or estimated computationally using stress inference methods. Over the years, mechanical stress inference has become a non-invasive, low-cost computational method for estimating the relative intercellular stresses and intracellular pressures of tissues. This mini-review introduces and compares the static and dynamic modalities of stress inference, considering their advantages and limitations. To date, most software has focused on static inference, which requires only a single microscopy image as input. Although applicable in quasi-equilibrium states, this approach neglects the influence that cell rearrangements might have on the inference. In contrast, dynamic stress inference relies on a time series of microscopy images to estimate stresses and pressures. Here, we discuss both static and dynamic mechanical stress inference in terms of their physical, mathematical, and computational foundations and then outline what we believe are promising avenues for in silico inference of the mechanical states of tissues.

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窥视未来:在动态组织中推断力学。
细胞对彼此和环境施加力量,形成组织。由此产生的机械应力可以通过实验确定或使用应力推断方法计算估计。多年来,机械应力推断已成为一种非侵入性、低成本的计算方法,用于估计组织的相对细胞间应力和细胞内压力。这篇小综述介绍和比较静态和动态模式的应力推断,考虑他们的优点和局限性。到目前为止,大多数软件都专注于静态推理,这只需要一个显微镜图像作为输入。虽然这种方法适用于准平衡状态,但它忽略了细胞重排可能对推理产生的影响。相比之下,动态应力推断依赖于显微镜图像的时间序列来估计应力和压力。在这里,我们从物理、数学和计算基础的角度讨论了静态和动态机械应力推断,然后概述了我们认为组织机械状态的计算机推断有前途的途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biochemical Society transactions
Biochemical Society transactions 生物-生化与分子生物学
CiteScore
7.80
自引率
0.00%
发文量
351
审稿时长
3-6 weeks
期刊介绍: Biochemical Society Transactions is the reviews journal of the Biochemical Society. Publishing concise reviews written by experts in the field, providing a timely snapshot of the latest developments across all areas of the molecular and cellular biosciences. Elevating our authors’ ideas and expertise, each review includes a perspectives section where authors offer comment on the latest advances, a glimpse of future challenges and highlighting the importance of associated research areas in far broader contexts.
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