Normalized group activations based feature extraction technique using heterogeneous data for Alzheimer's disease classification.

IF 3.5 4区 计算机科学 Q2 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE PeerJ Computer Science Pub Date : 2024-11-28 eCollection Date: 2024-01-01 DOI:10.7717/peerj-cs.2502
Krishnakumar Vaithianathan, Julian Benadit Pernabas, Latha Parthiban, Mamoon Rashid, Sultan S Alshamrani
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Abstract

Several deep learning networks are developed to identify the complex atrophic patterns of Alzheimer's disease (AD). Among various activation functions used in deep neural networks, the rectifier linear unit is the most used one. Even though these functions are analyzed individually, group activations and their interpretations are still not explored for neuroimaging analysis. In this study, a unique feature extraction technique based on normalized group activations that can be applied to both structural MRI and resting-state-fMRI (rs-fMRI) is proposed. This method is split into two phases: multi-trait condensed feature extraction networks and regional association networks. The initial phase involves extracting features from various brain regions using different multi-layered convolutional networks. Then, multiple regional association networks with normalized group activations for all the regional pairs are trained and the output of these networks is given as input to a classifier. To provide an unbiased estimate, an automated diagnosis system equipped with the proposed feature extraction is designed and analyzed on multi-cohort Alzheimer's Disease Neuroimaging Initiative (ADNI) data to predict multi-stages of AD. This system is also trained/tested on heterogeneous features such as non-transformed features, curvelets, wavelets, shearlets, textures, and scattering operators. Baseline scans of 185 rs-fMRIs and 1442 MRIs from ADNI-1, ADNI-2, and ADNI-GO datasets are used for validation. For MCI (mild cognitive impairment) classifications, there is an increase of 1-4% in performance. The outcome demonstrates the good discriminatory behaviour of the proposed features and its efficiency on rs-fMRI time-series and MRI data to classify multiple stages of AD.

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基于归一化组激活的异构数据特征提取技术用于阿尔茨海默病分类。
开发了几个深度学习网络来识别阿尔茨海默病(AD)的复杂萎缩模式。在深度神经网络中使用的各种激活函数中,整流线性单元是应用最多的一种。尽管这些功能被单独分析,但群体激活及其解释仍未被用于神经影像学分析。在这项研究中,提出了一种独特的基于归一化组激活的特征提取技术,可以应用于结构MRI和静息状态fmri (rs-fMRI)。该方法分为两个阶段:多特征浓缩特征提取网络和区域关联网络。初始阶段包括使用不同的多层卷积网络从不同的大脑区域提取特征。然后,对所有区域对具有归一化组激活的多个区域关联网络进行训练,并将这些网络的输出作为分类器的输入。为了提供无偏估计,设计了一个配备了所提出的特征提取的自动诊断系统,并对多队列阿尔茨海默病神经成像倡议(ADNI)数据进行了分析,以预测AD的多阶段。该系统还对非变换特征、曲线、小波、shearlet、纹理和散射算子等异构特征进行了训练/测试。来自ADNI-1、ADNI-2和ADNI-GO数据集的185个rs- fmri和1442个mri基线扫描用于验证。对于轻度认知障碍(MCI)分类,表现提高了1-4%。结果表明,所提出的特征具有良好的区分行为,并且在rs-fMRI时间序列和MRI数据上有效地对AD的多个阶段进行分类。
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来源期刊
PeerJ Computer Science
PeerJ Computer Science Computer Science-General Computer Science
CiteScore
6.10
自引率
5.30%
发文量
332
审稿时长
10 weeks
期刊介绍: PeerJ Computer Science is the new open access journal covering all subject areas in computer science, with the backing of a prestigious advisory board and more than 300 academic editors.
期刊最新文献
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