Unsupervised method for representation transfer from one brain to another.

IF 2.5 4区 医学 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY Frontiers in Neuroinformatics Pub Date : 2024-11-28 eCollection Date: 2024-01-01 DOI:10.3389/fninf.2024.1470845
Daiki Nakamura, Shizuo Kaji, Ryota Kanai, Ryusuke Hayashi
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Abstract

Although the anatomical arrangement of brain regions and the functional structures within them are similar across individuals, the representation of neural information, such as recorded brain activity, varies among individuals owing to various factors. Therefore, appropriate conversion and translation of brain information is essential when decoding neural information using a model trained using another person's data or to achieving brain-to-brain communication. We propose a brain representation transfer method that involves transforming a data representation obtained from one person's brain into that obtained from another person's brain, without relying on corresponding label information between the transferred datasets. We defined the requirements to enable such brain representation transfer and developed an algorithm that distills the assumption of common similarity structure across the brain datasets into a rotational and reflectional transformation across low-dimensional hyperspheres using encoders for non-linear dimensional reduction. We first validated our proposed method using data from artificial neural networks as substitute neural activity and examining various experimental factors. We then evaluated the applicability of our method to real brain activity using functional magnetic resonance imaging response data acquired from human participants. The results of these validation experiments showed that our method successfully performed representation transfer and achieved transformations in some cases that were similar to those obtained when using corresponding label information. Additionally, we reconstructed images from individuals' data without training personalized decoders by performing brain representation transfer. The results suggest that our unsupervised transfer method is useful for the reapplication of existing models personalized to specific participants and datasets to decode brain information from other individuals. Our findings also serve as a proof of concept for the methodology, enabling the exchange of the latent properties of neural information representing individuals' sensations.

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虽然不同个体的大脑区域解剖结构和其中的功能结构相似,但由于各种因素,神经信息(如记录的大脑活动)在个体间的表现形式却各不相同。因此,在使用他人数据训练的模型解码神经信息或实现脑对脑交流时,对大脑信息进行适当的转换和翻译至关重要。我们提出了一种大脑表征转换方法,即把从一个人大脑中获得的数据表征转换成从另一个人大脑中获得的数据表征,而不依赖于转换数据集之间的相应标签信息。我们定义了实现这种大脑表征转换的要求,并开发了一种算法,利用编码器进行非线性降维,将大脑数据集之间的共同相似性结构假设提炼为低维超球的旋转和反射转换。我们首先使用人工神经网络的数据作为替代神经活动,并检查了各种实验因素,验证了我们提出的方法。然后,我们利用从人类参与者那里获得的功能性磁共振成像反应数据,评估了我们的方法对真实大脑活动的适用性。这些验证实验的结果表明,我们的方法成功地进行了表征转移,并在某些情况下实现了与使用相应标签信息时相似的转换。此外,我们还通过进行大脑表征转移,在不训练个性化解码器的情况下从个人数据中重建了图像。结果表明,我们的无监督转移方法有助于将现有的针对特定参与者和数据集的个性化模型重新应用于解码其他个体的大脑信息。我们的研究结果也证明了这一方法的概念,它可以交换代表个人感觉的神经信息的潜在属性。
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来源期刊
Frontiers in Neuroinformatics
Frontiers in Neuroinformatics MATHEMATICAL & COMPUTATIONAL BIOLOGY-NEUROSCIENCES
CiteScore
4.80
自引率
5.70%
发文量
132
审稿时长
14 weeks
期刊介绍: Frontiers in Neuroinformatics publishes rigorously peer-reviewed research on the development and implementation of numerical/computational models and analytical tools used to share, integrate and analyze experimental data and advance theories of the nervous system functions. Specialty Chief Editors Jan G. Bjaalie at the University of Oslo and Sean L. Hill at the École Polytechnique Fédérale de Lausanne are supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics and the public worldwide. Neuroscience is being propelled into the information age as the volume of information explodes, demanding organization and synthesis. Novel synthesis approaches are opening up a new dimension for the exploration of the components of brain elements and systems and the vast number of variables that underlie their functions. Neural data is highly heterogeneous with complex inter-relations across multiple levels, driving the need for innovative organizing and synthesizing approaches from genes to cognition, and covering a range of species and disease states. Frontiers in Neuroinformatics therefore welcomes submissions on existing neuroscience databases, development of data and knowledge bases for all levels of neuroscience, applications and technologies that can facilitate data sharing (interoperability, formats, terminologies, and ontologies), and novel tools for data acquisition, analyses, visualization, and dissemination of nervous system data. Our journal welcomes submissions on new tools (software and hardware) that support brain modeling, and the merging of neuroscience databases with brain models used for simulation and visualization.
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