Protocol for establishing CRISPR-Cas12a for efficient genome editing of Pseudomonas aeruginosa phages.

IF 1.3 Q4 BIOCHEMICAL RESEARCH METHODS STAR Protocols Pub Date : 2024-12-20 Epub Date: 2024-12-11 DOI:10.1016/j.xpro.2024.103488
Bingjie Yan, Yujia Liu, Yumei Cai, Yuqing Liu, Yibao Chen
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Abstract

We developed an efficient type V CRISPR-Cas12a system tailored specifically for Pseudomonas aeruginosa phages, showcasing its remarkable cleavage activity and the ability to precisely introduce genetic modifications, including point mutations, deletions, and insertions, into phage genomes. Here, we present a protocol for establishing CRISPR-Cas12a for genome editing of Pseudomonas aeruginosa phages. We describe steps for the construction of pCRISPR-12a plasmid and guide RNA and the utilization of the type V CRISPR-Cas12a system for precise genetic editing of phages. For complete details on the use and execution of this protocol, please refer to Chen et al.1.

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建立用于铜绿假单胞菌噬菌体高效基因组编辑的 CRISPR-Cas12a 协议。
我们开发了一种高效的V型CRISPR-Cas12a系统,专门为铜绿假单胞菌噬菌体量身定制,展示了其卓越的切割活性和精确地将遗传修饰(包括点突变、缺失和插入)引入噬菌体基因组的能力。在这里,我们提出了一种构建用于铜绿假单胞菌噬菌体基因组编辑的CRISPR-Cas12a的方案。我们描述了构建pCRISPR-12a质粒和引导RNA的步骤,以及利用V型CRISPR-Cas12a系统对噬菌体进行精确的基因编辑。有关该协议的使用和执行的完整细节,请参见Chen等人1。
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来源期刊
STAR Protocols
STAR Protocols Biochemistry, Genetics and Molecular Biology-General Biochemistry, Genetics and Molecular Biology
CiteScore
2.00
自引率
0.00%
发文量
789
审稿时长
10 weeks
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