Viedma deracemization mechanisms in self-assembly processes†

IF 2.9 3区 化学 Q3 CHEMISTRY, PHYSICAL Physical Chemistry Chemical Physics Pub Date : 2024-12-17 DOI:10.1039/D4CP03910F
Josep M. Ribó, David Hochberg, Thomas Buhse and Jean-Claude Micheau
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Abstract

Simulations on an ODE-based model shows that there are many common points between Viedma deracemization and chiral self-assemblies of achiral building blocks towards chiral nanoparticles. Both systems occur in a closed system with energy exchange but no matter exchange with the surroundings and show parallel reversible growth mechanisms which coexist with an irreversible cluster breaking (grinding). The various mechanisms of growth give rise to the formation of polymerization/depolymerization cycles while the consecutive transformation of achiral monomer into chiral cluster results into an indirect enantioselective autocatalysis. Deracemization occurs by the destabilization of the racemic non-equilibrium stationary state likely because of the excess of entropy production generated by the coupling of the reversible cluster growth mechanisms with grinding. Results show that the SMSB bias from the racemic composition occurs already at the oligomeric level of polymerization. Our model goes beyond the scope of the effect of grinding by the stirring of solutions which is thoroughly reported in supramolecular chirality. For instance, some unique characteristics, as those of a SMSB in closed systems, the simultaneous presence of different coupled reversible growth mechanisms, the activation by a depolymerization agent and the reincorporation of oligomers to the polymer growth reactions, could be adapted to replicator selectivity and to the emergence of biological homochirality scenarios.

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自组装过程中的维德玛脱模机制
基于ode模型的仿真结果表明,Viedma离消旋与非手性构建块的手性自组装之间存在许多共同点。这两种体系都发生在一个能量交换但不与外界物质交换的封闭体系中,表现出平行的可逆生长机制,并与不可逆的团簇破碎(研磨)共存。不同的生长机制导致聚合/解聚循环的形成,而非手性单体连续转化为手性簇导致间接的对映选择性自催化。脱消旋是由外消旋非平衡定态的不稳定引起的,这可能是由于可逆簇生长机制与研磨耦合产生的熵产过剩造成的。结果表明,外消旋组成的SMSB偏倚已经发生在聚合的低聚体水平上。我们的模型超越了在超分子手性中被充分报道的溶液搅拌对研磨的影响范围。例如,一些独特的特征,如封闭系统中的SMSB,同时存在不同的耦合可逆生长机制,解聚剂的激活和低聚物重新加入聚合物生长反应,可以适应复制子选择性和生物同手性情景的出现。
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来源期刊
Physical Chemistry Chemical Physics
Physical Chemistry Chemical Physics 化学-物理:原子、分子和化学物理
CiteScore
5.50
自引率
9.10%
发文量
2675
审稿时长
2.0 months
期刊介绍: Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.
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