Critical Role of Water beyond the Media to Maintain Protein Stability and Activity in Hydrated Deep Eutectic Solvent.

IF 2.9 2区 化学 Q3 CHEMISTRY, PHYSICAL The Journal of Physical Chemistry B Pub Date : 2025-01-09 Epub Date: 2024-12-17 DOI:10.1021/acs.jpcb.4c07039
Tanmoy Khan, Nilimesh Das, Suman Bhowmik, Kuldeep Singh Negi, Pratik Sen
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Abstract

Hydrated deep eutectic solvents (DESs) are recognized for their potential in biocatalysis due to their tunability, biocompatibility, greenness, and ability to keep protein stable and active. However, the mechanisms governing enzyme stability and activity in DES remain poorly understood. Herein, using bromelain as the model enzyme and acetamide (0.5)/urea(0.3)/sorbitol(0.2) as the model DES, we provide experimental evidence that modulation of associated water plays a key role in dictating protein stability and activity in hydrated DES. Specifically, rigid associated water at higher DES concentrations (beyond 40% v/v) stabilizes bromelain through entropy but destabilizes it through enthalpy. On the other hand, flexible associated water dynamics at lower DES concentrations result in an opposite thermodynamic outcome. Importantly, the bulk water dynamics cannot explain the stability trend, which emphasizes the critical role of water near the protein surface. Strikingly, associated water dynamics also correlates strongly with bromelain's proteolytic activity. An increasing flexibility of the associated water dynamics leads to the enhancement of the activity. This is the first study to experimentally link associated water dynamics to enzyme behavior in hydrated DES, offering insights that could guide future developments in solvent engineering for enzyme catalysis.

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水在水合深共晶溶剂中维持蛋白质稳定性和活性的关键作用。
水合深共晶溶剂(DESs)由于其可调性、生物相容性、绿色以及保持蛋白质稳定和活性的能力而在生物催化方面具有广泛的应用前景。然而,在DES中控制酶稳定性和活性的机制仍然知之甚少。本研究以菠萝蛋白酶为模型酶,以乙酰胺(0.5)/尿素(0.3)/山梨糖醇(0.2)为模型DES,通过实验证明,相关水的调节在水合DES中对蛋白质的稳定性和活性起着关键作用。具体而言,高DES浓度(超过40% v/v)下的刚性相关水通过熵稳定菠萝蛋白酶,但通过焓使其不稳定。另一方面,在较低DES浓度下,柔性相关的水动力学会导致相反的热力学结果。重要的是,体积水动力学不能解释稳定性趋势,这强调了蛋白质表面附近水的关键作用。引人注目的是,相关的水动力学也与菠萝蛋白酶的蛋白水解活性密切相关。相关水动力学的灵活性增加导致活动的增强。这是首次通过实验将水动力学与水合DES中酶的行为联系起来的研究,为指导酶催化溶剂工程的未来发展提供了见解。
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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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