Adsorption of sulfur mustard on the transition metals (TM = Ti2+, Cr2+, Fe2+, Co2+, Ni2+, Cu2+, Zn2+) porphyrins induced in carbon nanocone (TM-PCNC): Insight from DFT calculation

IF 3 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Journal of molecular graphics & modelling Pub Date : 2024-12-12 DOI:10.1016/j.jmgm.2024.108928
Ahmad Saeed Hessen , Nahed Mahmood Ahmed Alsultany , Hala Bahir , A. Husein Adthab , Somayeh Soleimani-Amiri , Sheida Ahmadi , Esmail Vessally , Azadeh Khanmohammadi
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Abstract

The density functional theory (DFT) method is applied to investigate the ability of transition metals porphyrins induced in carbon nanocone (TM-PCNC, TM = Ti2+, Cr2+, Fe2+, Co2+, Ni2+, Cu2+, and Zn2+) for identifying and eliminating undesirable SM molecules from the surrounding. The sulfur mustard is effectively adsorbed onto the surface of nanocones through a chemical process. Based on the DFT calculations, the Ti-PCNC displays an appropriate percentage change in energy gap (%ΔEg = 11.82 and 14.67), thus making it a promising candidate for possessing sensing capabilities towards the sulfur mustard. According to the acquired findings, it can be deduced that the work function of nanocones exhibits minimal alterations after the adsorption of sulfur mustard. This signifies that nanocones may not serve as a suitable work function sensor for sulfur mustard detection. In addition, when the UV–visible spectra of pristine Ti-PCNC are compared with its complexes, it is found that sulfur mustard adsorption does not change the nanocones spectra but increases the number of absorption lines.

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碳纳米锥(TM- pcnc)诱导过渡金属(TM = Ti2+, Cr2+, Fe2+, Co2+, Ni2+, Cu2+, Zn2+)卟啉对芥子硫的吸附:来自DFT计算的见解
采用密度泛函理论(DFT)方法研究了碳纳米锥体中诱导的过渡金属卟啉(TM- pcnc, TM = Ti2+, Cr2+, Fe2+, Co2+, Ni2+, Cu2+, Zn2+)识别和去除周围有害SM分子的能力。硫芥通过化学过程被有效地吸附在纳米锥体表面。基于DFT计算,Ti-PCNC显示出适当的能量间隙百分比变化(%ΔEg = 11.82和14.67),因此使其成为具有对芥子气传感能力的有希望的候选者。根据所获得的结果,可以推断出纳米锥在硫芥菜吸附后的功函数变化很小。这表明纳米锥可能不能作为一种合适的工作函数传感器用于芥子气检测。此外,将原始Ti-PCNC与其配合物的紫外可见光谱进行比较,发现芥子气的吸附并未改变纳米锥光谱,但增加了吸收谱线的数量。
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来源期刊
Journal of molecular graphics & modelling
Journal of molecular graphics & modelling 生物-计算机:跨学科应用
CiteScore
5.50
自引率
6.90%
发文量
216
审稿时长
35 days
期刊介绍: The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design. As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.
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