Development of RNA reference materials for norovirus GI and GII using digital PCR.

Da-Hye Lee, Hyo Jung Ju, Yoojin Lee, Young-Kyung Bae
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Abstract

Norovirus is a highly virulent pathogen that causes enteritis in all age groups worldwide. Owing to the diversity of noroviruses, the development of vaccines and treatments is challenging, and an early and accurate diagnosis is crucial. Reference materials (RMs) developed previously for norovirus genotypes I (GI) and II (GII) were quantified using reverse transcription quantitative PCR. In this study, we developed norovirus GI and GII RMs as in vitro transcribed RNA forms. These RMs were then assigned reference values for the RNA copy number concentration. The concentrations of GI and GII RMs determined using in-house reverse transcription digital PCR assays were (1.92±0.37)×107 and (1.20±0.27)×107 copy/mL, respectively. The homogeneity and stability of the RMs were evaluated, and their compatibility with commercial diagnostic kits was validated. These RMs can be used for the development of detection assays, as calibrants for various molecular measurement techniques, and as test materials for internal and external quality assurance.

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利用数字PCR技术制备诺如病毒GI和GII的RNA对照物。
诺如病毒是一种高毒力病原体,可在全世界所有年龄组引起肠炎。由于诺如病毒的多样性,疫苗和治疗方法的开发具有挑战性,早期和准确诊断至关重要。利用反转录定量PCR对先前为诺如病毒基因型I (GI)和基因型II (GII)开发的对照物质(RMs)进行定量分析。在这项研究中,我们开发了诺如病毒GI和GII rm作为体外转录RNA形式。然后将这些RMs分配为RNA拷贝数浓度的参考值。内部逆转录数字PCR检测的GI和GII均方根分别为(1.92±0.37)×107和(1.20±0.27)×107 copy/mL。评估均方根的均匀性和稳定性,并验证其与商用诊断试剂盒的兼容性。这些均方根可用于开发检测分析,作为各种分子测量技术的校准剂,以及作为内部和外部质量保证的测试材料。
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