Delving deep into the draft genome of Mangrovibacter sp. SLW1, isolated from Sundarbans mangrove.

Access microbiology Pub Date : 2024-08-21 eCollection Date: 2024-01-01 DOI:10.1099/acmi.0.000847.v3
Arindam Roy, Anwesha Ghosh, Punyasloke Bhadury
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Abstract

Mangrovibacter sp. SLW1, a Gram-negative, aerobic, motile bacterium, was isolated from mangrove litterfall in Sundarbans mangrove. The draft genome is 5.5 Mbp in size with 49.45 mol% guanine-cytosine (GC) content. The linear chromosome of the bacterium consists of 27 contigs with 7339 coding sequences. The detailed in silico analyses of the genome of Mangrovibacter sp. SLW1 provide information on ecological adaptation. The genome is a reservoir for multiple heavy metals and metalloid resistance gene clusters as well as exhibit metabolic capabilities for utilization of a wide range of carbohydrates. It also encodes for tris-catecholate siderophore and can regulate uptake of iron thereby may influence plant growth such as mangrove vegetation.

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深入研究从孙德尔本斯红树林分离的Mangrovibacter sp. SLW1的基因组草图。
从孙德尔本斯红树林凋落物中分离到革兰氏阴性需氧活动细菌Mangrovibacter sp. SLW1。基因组草图大小为5.5 Mbp,鸟嘌呤-胞嘧啶(GC)含量为49.45 mol%。该细菌的线性染色体由27个contigs和7339个编码序列组成。对Mangrovibacter sp. SLW1基因组的详细计算机分析为其生态适应提供了信息。基因组是多种重金属和类金属抗性基因簇的储存库,并表现出利用多种碳水化合物的代谢能力。它还编码三儿茶酸铁载体,可以调节铁的吸收,从而可能影响植物的生长,如红树林植被。
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