{"title":"Interactive Pulmonary Lobe Segmentation in CT Images Based on Oriented Derivative of Stick Filter and Surface Fitting Model","authors":"Yuanyuan Peng, Jiawei Liao, Xuemei Xu, Zixu Zhang, Siqiang Zhu","doi":"10.1002/ima.70011","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>Automated approaches for pulmonary lobe segmentation frequently encounter difficulties when applied to clinically significant cases, primarily stemming from factors such as incomplete and blurred pulmonary fissures, unpredictable pathological deformation, indistinguishable pulmonary arteries and veins, and severe damage to the lung trachea. To address these challenges, an interactive and intuitive approach utilizing an oriented derivative of stick (ODoS) filter and a surface fitting model is proposed to effectively extract and repair incomplete pulmonary fissures for accurate lung lobe segmentation in computed tomography (CT) images. First, an ODoS filter was employed in a two-dimensional (2D) space to enhance the visibility of pulmonary fissures using a triple-stick template to match the curvilinear structures across various orientations. Second, a three-dimensional (3D) post-processing pipeline based on a direction partition and integration approach was implemented for the initial detection of pulmonary fissures. Third, a coarse-to-fine segmentation strategy is utilized to eliminate extraneous clutter and rectify missed pulmonary fissures, thereby generating accurate pulmonary fissure segmentation. Finally, considering that pulmonary fissures serve as physical boundaries of the lung lobes, a multi-projection technique and surface fitting model were combined to generate a comprehensive fissure surface for pulmonary lobe segmentation. To assess the effectiveness of our approach, we actively participated in an internationally recognized lung lobe segmentation challenge known as LObe and Lung Analysis 2011 (LOLA11), which encompasses 55 CT scans. The validity of the proposed methodology was confirmed by its successful application to a publicly accessible challenge dataset. Overall, our method achieved an average intersection over union (IoU) of 0.913 for lung lobe segmentation, ranking seventh among all participants so far. Furthermore, experimental outcomes demonstrated excellent performance compared with other methods, as evidenced by both visual examination and quantitative evaluation.</p>\n </div>","PeriodicalId":14027,"journal":{"name":"International Journal of Imaging Systems and Technology","volume":"35 1","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Imaging Systems and Technology","FirstCategoryId":"94","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/ima.70011","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
引用次数: 0
Abstract
Automated approaches for pulmonary lobe segmentation frequently encounter difficulties when applied to clinically significant cases, primarily stemming from factors such as incomplete and blurred pulmonary fissures, unpredictable pathological deformation, indistinguishable pulmonary arteries and veins, and severe damage to the lung trachea. To address these challenges, an interactive and intuitive approach utilizing an oriented derivative of stick (ODoS) filter and a surface fitting model is proposed to effectively extract and repair incomplete pulmonary fissures for accurate lung lobe segmentation in computed tomography (CT) images. First, an ODoS filter was employed in a two-dimensional (2D) space to enhance the visibility of pulmonary fissures using a triple-stick template to match the curvilinear structures across various orientations. Second, a three-dimensional (3D) post-processing pipeline based on a direction partition and integration approach was implemented for the initial detection of pulmonary fissures. Third, a coarse-to-fine segmentation strategy is utilized to eliminate extraneous clutter and rectify missed pulmonary fissures, thereby generating accurate pulmonary fissure segmentation. Finally, considering that pulmonary fissures serve as physical boundaries of the lung lobes, a multi-projection technique and surface fitting model were combined to generate a comprehensive fissure surface for pulmonary lobe segmentation. To assess the effectiveness of our approach, we actively participated in an internationally recognized lung lobe segmentation challenge known as LObe and Lung Analysis 2011 (LOLA11), which encompasses 55 CT scans. The validity of the proposed methodology was confirmed by its successful application to a publicly accessible challenge dataset. Overall, our method achieved an average intersection over union (IoU) of 0.913 for lung lobe segmentation, ranking seventh among all participants so far. Furthermore, experimental outcomes demonstrated excellent performance compared with other methods, as evidenced by both visual examination and quantitative evaluation.
期刊介绍:
The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals.
IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging.
The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered.
The scope of the journal includes, but is not limited to, the following in the context of biomedical research:
Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.;
Neuromodulation and brain stimulation techniques such as TMS and tDCS;
Software and hardware for imaging, especially related to human and animal health;
Image segmentation in normal and clinical populations;
Pattern analysis and classification using machine learning techniques;
Computational modeling and analysis;
Brain connectivity and connectomics;
Systems-level characterization of brain function;
Neural networks and neurorobotics;
Computer vision, based on human/animal physiology;
Brain-computer interface (BCI) technology;
Big data, databasing and data mining.